Rv0001 - c.714C>G
Drug resistance types
7 Sensitive
2 RR-TB
18 HR-TB
15 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 21 |
| lineage4.8 | 4 |
| La2;lineage2.2 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.2.1 | 2 |
| La1.7;lineage4.9 | 3 |
| La3;lineage4.9 | 1 |
| La1.7.1 | 1 |
| La2;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| 1 | |
| lineage3 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 49 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283018 | HR-TB | lineage4.9 | None | SRR28239846 | Sensitive | lineage4.8 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR12554855 | Sensitive | lineage4.8 | None | SRR11033666 | Sensitive | lineage4.8 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | SRR28240185 | Sensitive | lineage4.8 | None | ERR987722 | MDR-TB | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR6866807 | RR-TB | lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None |
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