Rv0676c - c.2544G>C
Drug resistance types
13 Sensitive
1 RR-TB
86 HR-TB
10 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
51 Other
lineage Counts
| lineage | Count |
|---|---|
| 92 | |
| lineage4.9 | 14 |
| lineage4.9;La3 | 1 |
| La1.2 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.3 | 1 |
| lineage4 | 18 |
| lineage2.2.1 | 7 |
| lineage2.2 | 5 |
| lineage4.3.4.1 | 2 |
| La2 | 1 |
| lineage3.1 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.8 | 2 |
| La1 | 2 |
| La1.8.1 | 1 |
| lineage3 | 1 |
| lineage2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.2 | 1 |
| La3 | 1 |
| lineage4.5 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 169 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19304036 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR25827682 | Other | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR176778 | HR-TB | None | SRR23961549 | Other | La1.2 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR176779 | HR-TB | None | ERR176751 | HR-TB | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675270 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR181887 | HR-TB | None | SRR3675383 | HR-TB | None | ERR176740 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | SRR3675510 | Other | None | ERR212121 | HR-TB | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675572 | Other | None | ERR234659 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | ERR2693230 | Other | None | SRR6046210 | Other | lineage4 | None | ERR2693254 | Other | None | ERR2660539 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | ERR4819051 | Other | lineage4 | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None | SRR6045555 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6045010 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6046015 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046644 | HR-TB | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR11466444 | Sensitive | lineage4.3.4.1 | None | SRR7496509 | Other | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502524 | HR-TB | La2 | None | SRR7535082 | Sensitive | lineage4 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR323043 | HR-TB | None | ERR323041 | HR-TB | None | ERR11465579 | Sensitive | lineage4.3.4.1 | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR1063859 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR11049020 | Other | lineage4.8 | None | ERR108471 | HR-TB | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3283025 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3797014 | Other | None | ERR3468544 | HR-TB | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797048 | HR-TB | None | ERR3797067 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797061 | Other | None | ERR4407463 | HR-TB | None | ERR3797069 | Other | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797083 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4800341 | Other | lineage3 | None | ERR473332 | Other | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797264 | Sensitive | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6358979 | Other | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR702404 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736839 | Other | None | ERR736865 | HR-TB | None | ERR9117709 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR987722 | HR-TB | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1169194 | Other | None | SRR1169306 | Other | None | SRR1172310 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1173400 | Other | None | SRR1172817 | HR-TB | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR1174897 | HR-TB | None | SRR1175074 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR12416824 | HR-TB | None | SRR12142341 | HR-TB | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR15368973 | Other | None | SRR1792478 | HR-TB | La1.7.1 | None |
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