lineage | Count |
---|---|
36 | |
lineage2.2.1 | 8 |
lineage4.3.4 | 2 |
lineage4 | 13 |
lineage3 | 2 |
lineage4.8 | 2 |
lineage2.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3.2.1 | 1 |
lineage2.2.1.1 | 4 |
spoligotype | Count |
---|---|
None | 70 |
ID | Drug resistance | Lineage | Country iso2 | ERR176778 | HR-TB | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR181887 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675501 | HR-TB | None | ERR176779 | HR-TB | None | ERR158583 | HR-TB | None | ERR181744 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR176651 | HR-TB | None | SRR3675502 | Other | None | SRR3675550 | Other | None | ERR212123 | Other | None | ERR212034 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR3675571 | HR-TB | None | ERR2229659 | Sensitive | lineage4.8 | None | ERR2229358 | Other | lineage4.8 | None | SRR5341400 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341418 | Other | None | SRR6046482 | HR-TB | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR6045519 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6480506 | Sensitive | lineage2.2.1 | None | SRR6046824 | HR-TB | None | ERR3283025 | HR-TB | None | ERR294266 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR1063862 | HR-TB | None | ERR133986 | HR-TB | None | ERR502889 | Other | None | ERR323045 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR400529 | Other | lineage3 | None | ERR403298 | HR-TB | lineage4 | None | ERR4798406 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736839 | Other | None | ERR736875 | HR-TB | lineage4 | None | ERR7801202 | HR-TB | lineage4.3.4.2.1 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR9119669 | HR-TB | None | SRR10808812 | Sensitive | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR3439432 | Other | None | ERR3445502 | HR-TB | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None |
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