Rv0486 - c.558G>C


Drug resistance types
15 Sensitive 5 RR-TB 49 HR-TB 16 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 43 Other
lineage Counts
lineage Count
lineage2.2.1 9
La3;lineage4 1
La2;lineage2.2 1
M.canetti;lineage2.1;lineage4.9 7
lineage4.9 43
lineage2.2 3
La3;lineage4.9 8
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La1.7;lineage4.9 10
lineage1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4 3
lineage4.4.1.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.8 1
lineage4.1.2.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 3
2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La1.7;M.canetti;lineage4.9 2
lineage2.2.1.2;lineage7 1
lineage2.2.1.2 1
lineage4.3.4 1
La1.7 1
La1.7;lineage3.1;lineage4 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
La1.7.1;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
lineage1.1.2 1
La1;lineage4.1.2 1
lineage4.9;lineage7 1
lineage2.1;lineage2.2;lineage6.3 1
lineage2.2.1.1 3
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.6.3;lineage4.9 1
La2;lineage4.9 1
La1.7;lineage4.3.4.1 1
La1.7.1;La1.7.X-unk4 1
lineage4.9;lineage9 1
lineage3 1
lineage4.9;lineage6.1.3 1
lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 130
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SAMN02585910 Other lineage2.2.1 None
ERR3283028 Other La3;lineage4 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR3797048 Other La3;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4769474 HR-TB lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR212138 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR3797064 Other La3;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR2229542 Other lineage4.8 None
SRR29096246 Sensitive La1.7;lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1183145 Other lineage2.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR28351339 MDR-TB lineage4 None
ERR4817060 Other None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR926165 Sensitive lineage4.9 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None
ERR736817 HR-TB lineage4.3.4 None
SRR12142339 HR-TB lineage2.2.1 None
ERR502511 Sensitive lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4830353 Other La1.7 None
ERR4798099 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4769450 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4798139 RR-TB lineage1.1.2 None
ERR1063849 HR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4769452 Other lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
SRR1180270 Other lineage2.2.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR176651 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR16156817 Other lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
SRR6789626 Other None
ERR3797063 Sensitive La3;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR926163 Other lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR28044873 Pre-XDR-TB lineage3 None
ERR176778 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None