Rv0486 - c.558G>C
Drug resistance types
18 Sensitive
2 RR-TB
83 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| 79 | |
| lineage4 | 26 |
| lineage4.1.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2 | 4 |
| lineage4.9 | 4 |
| lineage4.3.4.1;La1.7 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage2.2.1 | 9 |
| lineage1.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1.1 | 3 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1 | 1 |
| lineage4.8 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 140 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6789626 | Other | None | ERR502510 | Sensitive | lineage4 | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323045 | HR-TB | None | ERR323038 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR323055 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1063857 | HR-TB | None | ERR3283014 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283017 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR3283025 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3283047 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR4769452 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR8976043 | HR-TB | None | ERR736848 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR6358837 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736856 | HR-TB | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | SRR10808805 | Sensitive | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR1640750 | HR-TB | None | SRR14801749 | Sensitive | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR8692790 | RR-TB | lineage4 | None | SRR20970016 | Other | lineage2.2 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | None | SAMN02585910 | Other | lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675222 | Other | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675501 | HR-TB | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675510 | Other | None | SRR3675312 | HR-TB | lineage4 | None | ERR2229542 | Other | lineage4.8 | None | SRR3675545 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | SRR3675558 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212034 | HR-TB | None | SRR3675571 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816656 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341456 | Other | None | ERR4818929 | HR-TB | None | SRR6045952 | HR-TB | None | SRR5535933 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | ERR2693239 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR278594 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046397 | Other | None | SRR6046046 | Other | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | ERR4830353 | Other | None | SRR6511621 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | SRR6325442 | HR-TB | None |
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