Rv3596c - c.675C>G
Drug resistance types
15 Sensitive
14 RR-TB
26 HR-TB
15 MDR-TB
4 Pre-XDR-TB
2 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 2 |
| lineage4.1.2.1 | 6 |
| lineage4.9 | 33 |
| lineage2.2.1 | 10 |
| lineage4.6.2.2 | 2 |
| La1.7;lineage4.9 | 6 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage3;lineage4 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.1.1.3.1 | 1 |
| 2 | |
| La1;lineage4.9 | 1 |
| lineage3 | 8 |
| lineage4.2;lineage4.9 | 3 |
| M.canetti;lineage2.2 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1.1.1 | 1 |
| lineage4.7 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7 | 2 |
| lineage4.3.3 | 1 |
| lineage4.8 | 5 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.2.1 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.1.3 | 3 |
| La1.8.1 | 1 |
| lineage4.1;lineage4.8 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.5 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.3 | 1 |
| lineage4.4 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 131 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1183049 | RR-TB | lineage2.2 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR4817069 | RR-TB | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR3675222 | Other | La1.7 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR9896144 | Other | lineage3 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR7645927 | Other | lineage4.8 | None | SRR14782054 | Other | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR990545 | Other | lineage3 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR1062918 | Other | lineage3 | None | SRR5341456 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR5431730 | Other | La1.8.1 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4799025 | Other | lineage4.8 | None | SRR16156775 | Other | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR2446566 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR9786843 | Other | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1140716 | Other | lineage3 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR400529 | Other | lineage3 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None |
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