lineage | Count |
---|---|
46 | |
lineage4.8 | 1 |
lineage4.1.2.1 | 2 |
lineage4 | 35 |
lineage4.9 | 14 |
lineage2.2.1 | 5 |
La1.7.1 | 1 |
La1.8.1 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.3.4 | 2 |
lineage3 | 1 |
lineage5.2 | 1 |
lineage4.3.4.2 | 1 |
lineage4.1 | 1 |
lineage4.4.1.2 | 1 |
lineage4;lineage3.1 | 1 |
La1.2 | 1 |
lineage1.2.2.2 | 1 |
lineage2.2 | 1 |
lineage1.1.3.1 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 119 |
ID | Drug resistance | Lineage | Country iso2 | SRR10808805 | Sensitive | None | ERR9119669 | HR-TB | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR10809074 | Sensitive | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | ERR176778 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | ERR176751 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR181744 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR176651 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR212123 | Other | None | ERR181887 | HR-TB | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341315 | Sensitive | None | ERR2706950 | MDR-TB | lineage5.2 | cd | SRR6046141 | Other | lineage4.9 | None | ERR2653135 | MDR-TB | lineage4.3.4.2 | None | ERR4821655 | Sensitive | lineage4 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6044780 | Other | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6046492 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR8217918 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323045 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063896 | Sensitive | None | ERR1063855 | Other | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3283055 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473332 | Other | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798099 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR4811493 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR6866022 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR6866639 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR752229 | Other | lineage4.5 | None |
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