lineage | Count |
---|---|
lineage4 | 50 |
73 | |
lineage2.2.1 | 7 |
lineage3.1.2 | 1 |
lineage4.9 | 28 |
lineage2.2 | 2 |
lineage4.3.4 | 1 |
lineage6.1.3 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage2.2.1.1 | 2 |
lineage4.9;lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage4.2;La1.7 | 1 |
La1.7.1 | 1 |
lineage4.9;lineage4.6.3 | 1 |
lineage2.1 | 1 |
lineage1.2.1.1 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4.1.1.2 | 1 |
lineage4.8 | 2 |
lineage2 | 1 |
lineage4.9;lineage2.1 | 1 |
La2 | 1 |
lineage4.1.2 | 2 |
lineage4.4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.3.3 | 1 |
lineage4.3.4.1 | 1 |
La1.8.1 | 1 |
lineage4;lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 189 |
ID | Drug resistance | Lineage | Country iso2 | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4797264 | Sensitive | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798406 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR6866022 | Other | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866410 | Sensitive | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866639 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | ERR987722 | HR-TB | None | ERR9787256 | Other | lineage6.1.3 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10808805 | Sensitive | None | SRR10808399 | Sensitive | lineage4 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR14801749 | Sensitive | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR176779 | HR-TB | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675502 | Other | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR158583 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675550 | Other | None | ERR176740 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675510 | Other | None | ERR212034 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR3675571 | HR-TB | None | ERR2229397 | Sensitive | lineage4.8 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816656 | HR-TB | None | ERR1035162 | Other | None | ERR4818929 | HR-TB | None | ERR4819051 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | SRR5153215 | MDR-TB | lineage2 | None | SRR5341387 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341418 | Other | None | ERR4819462 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341470 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR1023509 | Other | None | SRR5341461 | Sensitive | lineage4 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045053 | Other | None | SRR6045010 | Other | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6046046 | Other | None | SRR6046362 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046824 | HR-TB | None | SRR6046482 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR502889 | Other | None | SRR8217918 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323053 | HR-TB | None | ERR1034652 | Other | None | ERR323108 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR067681 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR1063859 | HR-TB | None | ERR1063896 | Sensitive | None | ERR133986 | HR-TB | None | ERR3283021 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3439432 | Other | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR4188247 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None |
---|