Rv1908c - p.Val151Ile
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
2 Sensitive
1 RR-TB
98 HR-TB
12 MDR-TB
16 Pre-XDR-TB
1 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 8 |
| lineage3 | 3 |
| lineage4.9;lineage6.3 | 6 |
| lineage2.2.2 | 13 |
| lineage4.9 | 26 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2.1 | 27 |
| lineage4.3.4 | 1 |
| lineage2;lineage4.9 | 2 |
| lineage2.1 | 4 |
| La3;lineage2.1;lineage4.9 | 2 |
| La2;lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La2;lineage4.9 | 2 |
| lineage4.9;lineage9 | 3 |
| lineage2.2.1.1 | 3 |
| 16 | |
| lineage4 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage2 | 1 |
| lineage4.6.1 | 1 |
| lineage4.5 | 3 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La1.7;lineage4.9 | 5 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2;lineage4 | 2 |
| lineage2.2.1;lineage2.2.2 | 5 |
| lineage2.2;lineage4.9 | 2 |
| lineage3.1.2.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage2.2.2;lineage4 | 5 |
| lineage2.2.2;lineage4.9 | 2 |
| La3;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.4.2 | 3 |
| lineage4.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage1.1.2 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage3.1 | 1 |
| lineage2.2.1.1;lineage4 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 185 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR1048980 | HR-TB | lineage3 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1048991 | HR-TB | lineage2;lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | SRR1013577 | HR-TB | lineage2.2.2 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR1048994 | HR-TB | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR1048983 | HR-TB | lineage2.2.1.1 | None | SRR6789626 | Other | None | ERR2027263 | Other | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4800341 | Other | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4810741 | HR-TB | None | SRR1049040 | HR-TB | lineage2 | None | SRR1013607 | HR-TB | lineage2.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR4811142 | RR-TB | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811311 | Other | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196546 | Other | lineage4.9 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360585 | HR-TB | lineage4.5 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR1049041 | HR-TB | lineage2.2.1;lineage4 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR1049023 | HR-TB | lineage4.9 | None | SRR1048966 | MDR-TB | lineage2.2.1 | None | SRR25827682 | Other | None | SRR1048981 | HR-TB | lineage3 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18213713 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3416776 | Other | lineage2.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048885 | HR-TB | lineage2.2;lineage4 | None | ERR4816999 | Other | None | SRR1048982 | HR-TB | lineage2.2.1.1 | None | ERR4811075 | Other | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119753 | Other | lineage4.9 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675236 | Other | None | SRR1048870 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1048852 | HR-TB | lineage2.2;lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR1023509 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR1049006 | HR-TB | lineage2.2.2;lineage4 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR1048992 | HR-TB | lineage2.2;lineage4 | None | ERR2514692 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR4817060 | Other | None | ERR234659 | Other | None | ERR4814352 | Other | lineage2.2.1 | None | SRR1048969 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1049022 | HR-TB | lineage2.2.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR1013622 | Pre-XDR-TB | lineage2.2.2 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR1048869 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR4811105 | HR-TB | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SAMN02360577 | HR-TB | lineage3 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR1013554 | MDR-TB | lineage2.2.2;lineage4 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1013578 | HR-TB | lineage2.2.2;lineage4 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR4816585 | Other | lineage2.2.1 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048988 | HR-TB | lineage2.2.1 | None | SRR1049027 | HR-TB | lineage2.2.2;lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1049026 | HR-TB | lineage2.2;lineage4.9 | None | SRR1048853 | HR-TB | lineage2;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1144759 | HR-TB | lineage2.2.2;lineage4 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1048968 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR176740 | Other | lineage4.9 | None | SRR1013599 | HR-TB | lineage2.2.1.1;lineage4 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR987722 | MDR-TB | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR1048886 | HR-TB | lineage2.2.2;lineage4 | None | SRR1049007 | HR-TB | lineage2.2.2 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR1048996 | Sensitive | lineage4.5 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1048965 | HR-TB | lineage2.2.1 | None | SRR1013604 | HR-TB | lineage2.2.1 | None |
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