Rv3596c - c.1104G>A
Drug resistance types
36 Sensitive
0 RR-TB
17 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 1 |
| lineage2.2.1 | 6 |
| lineage4.9 | 33 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| 1 | |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.8 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.9;lineage9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.3.3 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 71 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR12708416 | Sensitive | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR3675547 | Sensitive | lineage4.9 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR400345 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675522 | Other | lineage4.9 | None |
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