lineage | Count |
---|---|
lineage4 | 17 |
lineage2.2.1 | 4 |
lineage4.8 | 1 |
lineage4.9 | 20 |
38 | |
lineage4.3.4 | 2 |
lineage4.2.1.1 | 1 |
lineage4.4.1.1;lineage1.2.2.1 | 1 |
lineage4.4.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3.2 | 1 |
lineage4;lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 88 |
ID | Drug resistance | Lineage | Country iso2 | SRR22424765 | MDR-TB | lineage4 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR16089626 | Sensitive | lineage4.8 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675502 | Other | None | SRR3675501 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675222 | Other | None | SRR3675488 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675312 | HR-TB | lineage4 | None | ERR176651 | HR-TB | None | SRR3675412 | Sensitive | lineage4.9 | None | ERR181887 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675510 | Other | None | SRR3675550 | Other | None | ERR212123 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR4816656 | HR-TB | None | ERR1035162 | Other | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR1035138 | MDR-TB | None | SRR5341418 | Other | None | SRR6045519 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046482 | HR-TB | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | ERR4829219 | Sensitive | lineage4.9 | None | ERR4829483 | Other | lineage4.9 | it | SRR6046824 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR067681 | HR-TB | None | ERR11465711 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR502889 | Other | None | SRR7131204 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR294266 | HR-TB | None | ERR323045 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR1034652 | Other | None | ERR10748395 | MDR-TB | lineage4.3.2 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR3439432 | Other | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473332 | Other | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4798406 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4 | None |
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