SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR9117805
|
Other
|
lineage4.3.2
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
ERR990545
|
Other
|
lineage3
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR9117709
|
Other
|
|
None
|
SRR3675549
|
Other
|
lineage4.9
|
None
|
SRR3675449
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR12708389
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR28868888
|
Other
|
lineage1.1.3.2
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR7821163
|
Other
|
lineage2.2.1
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR9786843
|
Other
|
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
SRR6046196
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
SRR6046382
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR28351554
|
Sensitive
|
La1.6;lineage4
|
None
|
SRR29096203
|
Sensitive
|
lineage4.9
|
None
|
SRR3675505
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
SRR1175127
|
Other
|
lineage2.2.1.2
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR3675214
|
Other
|
lineage4.9
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
SRR3675501
|
Other
|
La1.7;lineage4.9
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR6046577
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR6045548
|
Sensitive
|
lineage4.9
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
ERR4769521
|
RR-TB
|
lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
ERR4816999
|
Other
|
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR29096276
|
Sensitive
|
lineage4.9
|
None
|
SRR29049025
|
Sensitive
|
lineage4.9
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
SRR3675236
|
Other
|
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
ERR3283044
|
Other
|
lineage4
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
SRR7535086
|
Other
|
|
None
|
SRR8217918
|
HR-TB
|
lineage4.9
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1180172
|
Other
|
lineage2.2.1
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675456
|
RR-TB
|
lineage4.9;lineage7
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
SRR3675488
|
Other
|
La1.7;lineage4.9
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
SRR1183106
|
RR-TB
|
lineage2.2.1.1
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
ERR181824
|
HR-TB
|
lineage4.9
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
SRR6046397
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
SRR3675555
|
HR-TB
|
lineage2.1;lineage4.9;lineage7
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR6045217
|
Sensitive
|
lineage4.9
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
SRR28351455
|
Other
|
lineage3.1.2.1;lineage4
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR7821126
|
Sensitive
|
lineage1.1.3.2
|
None
|
SRR3675520
|
Other
|
La1.7.X-unk4;lineage4.9
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
SRR7496517
|
Other
|
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
ERR323108
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR3675495
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR11466072
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
ERR176518
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR14801759
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4830353
|
Other
|
La1.7
|
None
|
SRR3675267
|
Other
|
La1.7;lineage4.9
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
SRR1169306
|
Other
|
La3;lineage4.9
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
SRR6046482
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR5311091
|
Other
|
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR294266
|
HR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR3283047
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
ERR11465015
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR7496509
|
Other
|
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
SRR6045519
|
MDR-TB
|
M.canetti;lineage4.9
|
None
|
ERR6358991
|
HR-TB
|
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
ERR11252612
|
Other
|
La3;lineage4.9
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR10808730
|
Other
|
lineage4.9
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
SRR3675539
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
SRR3675385
|
Other
|
La1.7;lineage4.9
|
None
|
SRR6044875
|
Sensitive
|
lineage4.9
|
None
|
ERR387051
|
Other
|
lineage4.9
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1183049
|
RR-TB
|
lineage2.2
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
ERR3797048
|
Other
|
La3;lineage4.9
|
None
|
SRR3675231
|
MDR-TB
|
lineage4.9;lineage7
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1181020
|
Other
|
lineage2.2.1
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
ERR1063857
|
MDR-TB
|
La2;lineage4.9
|
None
|
ERR4815604
|
Other
|
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
ERR216938
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR3675582
|
Other
|
lineage4.9
|
None
|