Rv0006 - c.1791C>G
Drug resistance types
13 Sensitive
1 RR-TB
21 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 1 |
| La1.8.1 | 1 |
| lineage4.9 | 22 |
| lineage4.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4 | 2 |
| lineage4.1.2.1 | 1 |
| La1.7.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| 1 | |
| lineage1.1.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.8 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.2.1 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.4 | 1 |
| La1.7 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 57 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR7240033 | Other | La1.8.1 | None | ERR373947 | Other | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR29097004 | Other | lineage3 | None | ERR181887 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | SRR29126472 | Sensitive | lineage4.1.2.1 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR29017081 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR9786843 | Other | None | ERR775803 | Sensitive | lineage1.1.1 | th | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR176651 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4830353 | Other | La1.7 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None |
|---|
