Rv0006 - c.-731T>C
Drug resistance types
51 Sensitive
7 RR-TB
65 HR-TB
20 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage6.3 | 1 |
| lineage4 | 2 |
| lineage4.9 | 87 |
| lineage4.6.2.2 | 3 |
| 6 | |
| La3;lineage4.9 | 9 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 5 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.2 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage5.2 | 2 |
| La1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.8 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2 | 3 |
| La3;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.2.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage2.2.1 | 3 |
| La3;lineage4.3.4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.3.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 3 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage6.1.2 | 1 |
| La1.6;lineage4 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage4.3.4.2.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage3 | 1 |
| lineage4.1.1.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;lineage4 | 1 |
| La2;lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 205 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR6789626 | Other | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR13046675 | Other | La1.2 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR6044835 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786843 | Other | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | ERR369162 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR369158 | Other | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR13046682 | Other | La1.2 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR161037 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR9786604 | Other | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR26159063 | RR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR926164 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR176751 | Other | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR373947 | Other | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR6046485 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR9786671 | Other | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR387051 | Other | lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR1063896 | Sensitive | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None |
|---|
