Rv0005 - c.1441C>T


Drug resistance types
19 Sensitive 10 RR-TB 52 HR-TB 26 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 61 Other
lineage Counts
lineage Count
La1.7;lineage4.9;lineage7 3
lineage4.8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La2;lineage4.9 1
M.canetti;lineage4.9 2
lineage4.9 65
lineage1.1.3.1 8
lineage2.2.1 5
lineage1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 2
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1.1.2 1
La1.7 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1;lineage4.1.2 1
lineage4.2;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.7;lineage4.9 12
lineage4.9;lineage6.3 2
lineage4 1
lineage4.5 1
lineage2.2 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.4 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La3;lineage4.9 4
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
lineage2.1 1
lineage2.2.1;lineage6.3 1
La1.7;M.canetti;lineage4.9 5
La1;lineage4.9 2
La1.7.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.2 1
lineage2.2.1.1 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.1.1.2 1
La3;lineage2.1;lineage4.9 1
La2;lineage2.2 1
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage4.9 1
La1.7;lineage3.1;lineage4 1
La1.7.1;La1.7.X-unk4 1
lineage4.3.4.1 1
lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage1.2.1.2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
lineage6.1.3 1
lineage4.4.1.2 1
La1.2.BCG 1
M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
spoligotype Counts
spoligotype Count
None 169
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR4797810 Sensitive lineage1.1.3.1 in
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR176751 HR-TB lineage4.9 None
ERR4829793 Sensitive lineage1.1.3.1 it
SRR10809074 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR3797047 MDR-TB lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR1183144 RR-TB lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4796929 Sensitive lineage4.9 None
SRR6046594 Other lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR28351339 MDR-TB lineage4 None
ERR752229 Other lineage4.5 None
ERR4819051 Sensitive lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR176651 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
SRR6797668 Sensitive lineage1.1.3.1 None
SRR6045010 Sensitive lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR926156 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR181887 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR926160 Other lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6650233 Sensitive lineage1.1.3.1 None
ERR2446566 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR6797729 Sensitive lineage1.1.3.1 None
ERR3283042 HR-TB lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR6046485 Other lineage4.9 None
ERR4553779 HR-TB lineage1.1.3.1 None
ERR4831043 Sensitive lineage1.1.3.1 np
ERR926161 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR6358979 HR-TB lineage4.9 None
ERR4799926 Sensitive lineage1.1.3.1 in
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR926165 Other lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6045526 Other lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6045219 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR11465801 Other lineage4.3.4.1 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR11068702 MDR-TB lineage1.2.1.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR12708392 Other lineage2.2.1 None
ERR9787153 Other lineage6.1.3 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR212125 HR-TB lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR926155 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4188247 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR6045555 Other lineage4.9 None