Rv0006 - c.396C>G
Drug resistance types
51 Sensitive
7 RR-TB
139 HR-TB
25 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
93 Other
lineage Counts
| lineage | Count |
|---|---|
| 150 | |
| lineage4 | 43 |
| lineage4.9 | 35 |
| lineage3 | 3 |
| lineage2 | 1 |
| lineage2.2.1 | 9 |
| lineage3.1.2 | 1 |
| lineage4.8 | 3 |
| lineage2.2 | 6 |
| lineage4.6.1.1 | 4 |
| lineage4.1.2.1.1 | 1 |
| lineage4.1.1 | 4 |
| lineage4.3.2 | 1 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.1.2.1 | 16 |
| lineage4.8;lineage4.1 | 2 |
| lineage6 | 2 |
| lineage6.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.4.1.1 | 2 |
| lineage3.1 | 3 |
| lineage1.2.1.2 | 1 |
| lineage4.5 | 1 |
| La1.8.1 | 4 |
| La1.7.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage2.2.1.1 | 1 |
| La2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4;lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 322 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769452 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798504 | Other | lineage3 | None | ERR4798099 | Other | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4810741 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736835 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR702406 | HR-TB | None | ERR702404 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR8976043 | HR-TB | None | ERR7910877 | MDR-TB | lineage4.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9634265 | Sensitive | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9119669 | HR-TB | None | ERR9786604 | Other | None | ERR9786569 | Other | lineage4.8 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9787197 | Other | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1158918 | Sensitive | lineage4 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1172234 | Other | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1169194 | Other | None | SRR1172817 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172951 | Other | None | SRR1173568 | Other | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173400 | Other | None | SRR1184294 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1175074 | MDR-TB | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1196768 | MDR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1184388 | Other | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR13861224 | Sensitive | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12416824 | HR-TB | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13861266 | Sensitive | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR14782405 | HR-TB | None | SRR1791696 | Other | La1.8.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19304036 | HR-TB | None | SRR19324818 | Sensitive | lineage1.1.1.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR26159035 | Sensitive | lineage4.9 | None | SRR6325445 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675482 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675488 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675501 | HR-TB | None | ERR181744 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675222 | Other | None | SRR3675234 | Other | None | ERR1750908 | Sensitive | lineage4 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675270 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675383 | HR-TB | None | ERR176751 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675510 | Other | None | ERR4816976 | Sensitive | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR212033 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212034 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675555 | HR-TB | None | SRR3675570 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None | ERR212123 | Other | None | SRR3675574 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR234659 | HR-TB | None | ERR4819051 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4818929 | HR-TB | None | SRR5341387 | Other | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341302 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | ERR2693257 | Other | None | SRR5341467 | Other | lineage4 | None | ERR2693239 | HR-TB | None | SRR5341366 | Sensitive | lineage4 | None | ERR2693231 | Other | None | SRR5341469 | Other | lineage4 | None | ERR4821053 | Other | lineage3 | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045053 | Other | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | ERR4829606 | Sensitive | lineage4.1.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6511621 | HR-TB | None | SRR6325442 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR323036 | HR-TB | None | ERR294248 | HR-TB | None | SRR6789626 | Other | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR294266 | HR-TB | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6831950 | Other | lineage4.3.3 | None | ERR502510 | Sensitive | lineage4 | None | ERR5311099 | HR-TB | None | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7535086 | Other | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR5311090 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | ERR323043 | HR-TB | None | ERR323041 | HR-TB | None | ERR323063 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063896 | Sensitive | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797061 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR4024991 | Other | None | ERR3797064 | Sensitive | None | ERR3797083 | HR-TB | None | ERR387051 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4188350 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR4407463 | HR-TB | None |
|---|
