lineage | Count |
---|---|
lineage4.9 | 7 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage2.2.1 | 3 |
lineage4 | 30 |
lineage3 | 2 |
lineage2.2 | 4 |
lineage4.3 | 1 |
58 | |
lineage4.8 | 2 |
lineage2.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 112 |
ID | Drug resistance | Lineage | Country iso2 | SRR1183965 | Sensitive | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR8692790 | RR-TB | lineage4 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR17658565 | Other | lineage3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR176568 | Other | lineage4.3 | None | ERR158583 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR4816151 | Other | lineage4.8 | None | ERR176643 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3675550 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212034 | HR-TB | None | ERR212121 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR5341453 | Sensitive | None | SRR5341387 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341418 | Other | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341456 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341303 | RR-TB | lineage4 | None | ERR2693227 | Other | lineage4.9 | None | SRR5341315 | Sensitive | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR6046362 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046397 | Other | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | ERR4831117 | HR-TB | None | ERR294266 | HR-TB | None | ERR502889 | Other | None | ERR502510 | Sensitive | lineage4 | None | SRR8217918 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | ERR067681 | HR-TB | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR1034652 | Other | None | ERR1063857 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None | ERR4024991 | Other | None | ERR4769521 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4188247 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798406 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358991 | HR-TB | None | ERR6866022 | Other | None | ERR6359045 | HR-TB | None | SRR1173568 | Other | lineage4.9 | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | ERR9634265 | Sensitive | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1173777 | Other | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None |
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