Rv0667 - c.828T>C
Drug resistance types
95 Sensitive
6 RR-TB
128 HR-TB
22 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
117 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 2 |
| 105 | |
| lineage4.1.2.1 | 25 |
| lineage4 | 75 |
| lineage1.1.2 | 2 |
| lineage2.2.1 | 23 |
| lineage3.1 | 2 |
| lineage1.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.9 | 63 |
| lineage4.7 | 2 |
| lineage2.2 | 3 |
| lineage4.9.1 | 1 |
| lineage4.3.4 | 2 |
| La1 | 2 |
| La1.8.1 | 4 |
| lineage4.1.3 | 2 |
| lineage5.1.2 | 1 |
| lineage3 | 13 |
| lineage2 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.8 | 3 |
| lineage4.5 | 5 |
| lineage4.3.4.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.1 | 3 |
| lineage4.3.4.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.1 | 3 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 2 |
| lineage2.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 376 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4831719 | MDR-TB | lineage2.2.1 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | SRR6785227 | Other | lineage2.2.1 | None | ERR294248 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR502943 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323038 | HR-TB | None | SRR7496517 | Other | None | SRR7496509 | Other | None | ERR323043 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR7535086 | Other | None | ERR323063 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR067712 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR3283031 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR3283010 | Other | La1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283028 | Other | None | ERR3283027 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3468544 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR363506 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797069 | Other | None | ERR3797071 | Other | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797082 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797083 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797313 | HR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4798431 | HR-TB | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4800341 | Other | lineage3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR5336148 | Other | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR6358837 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358979 | Other | None | ERR6359045 | HR-TB | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR702406 | HR-TB | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR8976043 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9634265 | Sensitive | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117709 | HR-TB | None | ERR9786569 | Other | lineage4.8 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786604 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9787197 | Other | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR069989 | HR-TB | lineage2 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861181 | Sensitive | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR13861611 | Sensitive | lineage4.9 | None | SRR19224232 | Sensitive | lineage2.2.1 | None | SRR16370229 | Sensitive | lineage2.2.1 | None | SRR1640750 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR1791696 | Other | La1.8.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR25827682 | Other | None | SRR8692887 | Other | None | SRR8692807 | Other | lineage4.9 | None | SRR8692822 | Other | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692800 | Other | lineage4 | None | SRR27450380 | HR-TB | lineage2.2.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR26558631 | HR-TB | lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675465 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675477 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1 | None | SRR6325445 | HR-TB | None | ERR161033 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR181744 | HR-TB | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4814683 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675221 | HR-TB | None | ERR3275450 | Other | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675236 | HR-TB | None | SRR3675279 | Other | None | SRR3675247 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675311 | Other | None | SRR3675383 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | ERR4815752 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675510 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816999 | Other | None | SRR3675542 | Other | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675571 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | SRR3675558 | HR-TB | None | ERR212123 | Other | None | SRR3675572 | Other | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816585 | Other | lineage2.2 | None | ERR4816656 | HR-TB | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR2229143 | Other | lineage4.1.1 | None | SRR7496472 | Other | None | ERR234659 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4819051 | Other | lineage4 | None | ERR3275220 | Other | lineage3 | nl | ERR4818929 | HR-TB | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5007188 | Other | lineage4 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4818615 | Other | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819304 | Sensitive | lineage4.1.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4819623 | Sensitive | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR1035138 | MDR-TB | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341313 | HR-TB | None | ERR2446382 | Other | lineage4 | None | ERR4819932 | Other | lineage4.7 | None | SRR5341315 | Sensitive | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR5341333 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2446118 | Other | lineage4.1.2.1 | nl | ERR2517475 | Other | lineage4 | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR5526360 | MDR-TB | lineage2.2.1.1 | None | SRR6045503 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR2446144 | Other | lineage3 | nl | SRR6046151 | Sensitive | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045952 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045086 | Other | lineage3 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR2517528 | Other | lineage3 | nl | SRR6046305 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | ERR4828628 | MDR-TB | lineage4.5 | None |
|---|
