Rv0006 - c.264C>T


Drug resistance types
65 Sensitive 2 RR-TB 49 HR-TB 12 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 57 Other
lineage Counts
lineage Count
La1.7 2
lineage2.2.1 10
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.9 92
lineage4.3.4.2.1 2
M.canetti;lineage2.2.2;lineage6.2 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
La1.7;lineage4.9 6
La1.8.1 1
lineage4.3.2.1 2
lineage4.1;lineage4.9 1
lineage4.4.1.1 1
La3;lineage4.3.4 1
La1;lineage2;lineage4.9 1
lineage4.1.1.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.2 2
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
2
lineage4.8;lineage4.9 2
lineage4.6.3;lineage4.9 1
M.canetti;lineage2.2 2
lineage4.1.2.1 4
La3;lineage4.9 1
lineage3 3
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage1;lineage4.9 2
lineage1.1.2 4
lineage4.1.1.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
La1;lineage4.9 2
M.canetti;lineage4.9 1
lineage6.1.3 2
La1.7;lineage4.2 1
lineage1.1.1;lineage4 1
La1.2.BCG 1
lineage5.1.4 1
lineage4 3
lineage4.1.1.3;lineage4.9 2
lineage4.9;lineage6.1.3 1
lineage4.6.2.2 2
lineage2.2.1.2;lineage7 1
lineage4.5 1
lineage4.1.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.2;La1.8.1 1
lineage4.2.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1;lineage4.1.2 1
lineage3;lineage4.9 1
lineage2.2.1.1 1
La1.7;M.canetti;lineage4.9 2
lineage3.1.2.1;lineage4 1
spoligotype Counts
spoligotype Count
None 189
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675222 Other La1.7 None
SRR9971114 Other lineage2.2.1 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR29096882 Sensitive lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1159378 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR3675492 Other La1.7;lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
SRR3675455 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
SRR6046492 Other lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR1063883 HR-TB lineage4.9 None
SRR29231298 Sensitive lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4814396 Sensitive lineage4.1.1.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR751326 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR12708416 Sensitive None
ERR4796929 Sensitive lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819422 HR-TB lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR181744 HR-TB La3;lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR11252736 Other lineage4.9 None
SRR28351347 Other lineage3 None
ERR4810624 MDR-TB lineage2.2 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR12708384 Sensitive lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR323115 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR21733217 Sensitive lineage1.1.2 None
ERR4820043 Sensitive lineage4.1.2.1 None
ERR4818252 Sensitive lineage4.1.1.2 None
SRR1175508 Sensitive lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6367399 MDR-TB lineage1.1.2 au
SRR6046564 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR473332 Other lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR9787153 Other lineage6.1.3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR9971112 Other lineage2.2.1 None
SRR3675585 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR5341299 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR2513283 Sensitive lineage5.1.4 None
SRR5341456 Other lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR4797313 Sensitive lineage2.2.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4819241 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR9786597 Other lineage4.6.2.2 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR137286 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR1063896 Sensitive None
SRR3675580 Sensitive lineage4.9 None
ERR502511 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR29096709 Sensitive lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341310 Other lineage1.1.2 None
ERR702405 Sensitive lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR5341345 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR502510 Sensitive lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR400326 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR29096530 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4816478 HR-TB lineage4 None
SRR12416842 HR-TB lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR5341467 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR4811454 Sensitive lineage3 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR28044873 Pre-XDR-TB lineage3 None
SRR29772583 MDR-TB lineage1.1.2 None
ERR4797474 Sensitive lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4796254 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
ERR323062 Sensitive lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1158918 Sensitive lineage4.9 None