lineage | Count |
---|---|
lineage4.1.2 | 2 |
lineage4 | 53 |
lineage2.2.1 | 6 |
lineage4.3.2.1 | 1 |
95 | |
lineage4.4.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.1.1.3 | 1 |
lineage2.2 | 3 |
lineage4.9 | 8 |
La1.2 | 1 |
lineage4.3.4 | 2 |
lineage5.2 | 2 |
lineage6 | 1 |
lineage4.6.2.2 | 3 |
lineage4.5 | 1 |
lineage2.1 | 1 |
lineage4.1.1.2 | 1 |
lineage3 | 1 |
lineage4.9;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 185 |
ID | Drug resistance | Lineage | Country iso2 | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323045 | HR-TB | None | ERR323041 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR133986 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283036 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797063 | HR-TB | None | ERR400336 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4407463 | HR-TB | None | ERR4024991 | Other | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4798406 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6866022 | Other | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR702406 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR736872 | Sensitive | lineage4 | None | ERR736867 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR736874 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119669 | HR-TB | None | ERR9786604 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786843 | Other | None | SRR10808805 | Sensitive | None | ERR9787197 | Other | None | SRR1172817 | HR-TB | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172951 | Other | None | SRR1173788 | Other | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR12416824 | HR-TB | None | SRR1196566 | HR-TB | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19304036 | HR-TB | None | SRR19303884 | HR-TB | None | ERR181744 | HR-TB | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675465 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR702405 | Sensitive | lineage2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR212123 | Other | None | SRR3675311 | Other | None | ERR176651 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | SRR3742665 | HR-TB | None | SRR7496472 | Other | None | SRR5341453 | Sensitive | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341456 | Other | None | SRR5341387 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341302 | HR-TB | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045555 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046824 | HR-TB | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045952 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6789626 | Other | None | ERR502510 | Sensitive | lineage4 | None | ERR502532 | HR-TB | None |
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