EBG00000313339 - n.1822C>T


Drug resistance types
52 Sensitive 2 RR-TB 32 HR-TB 13 MDR-TB 55 Pre-XDR-TB 13 XDR-TB 67 Other
lineage Counts
lineage Count
lineage2.2.1 69
lineage4.9 91
lineage4.3.3 3
lineage4.3.2.1 3
La1.7;lineage3.1;lineage4 1
lineage4.3.4.1 3
lineage2.2.2 1
La1.7;lineage4.9 7
lineage4.4.1.1 1
lineage4.1.2.1 6
lineage2.2;lineage4 1
lineage2.2.1.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.7;lineage4.3.4.1 1
La1.7 1
lineage4.1;lineage4.9 2
lineage4.1.1.3;lineage4.9 2
lineage4.3.4.2.1 4
M.canetti;lineage4.9;lineage9 1
4
lineage3 2
lineage4.2.1.1;lineage4.3.3 1
La1.7.1 1
lineage2.2.1;lineage3.1.2 1
lineage3.1.2.1 1
lineage4.9;lineage7 2
lineage4.1.1.3 3
lineage2.1;lineage4.9 1
lineage4.4.2 1
lineage4.5 1
lineage1.2.2.2 1
lineage1.2.2.1;lineage4.4.1.1 2
lineage4.4.1.2 1
lineage1.1.2;lineage2.2.1 1
lineage1.1.2 1
lineage2.2 1
lineage4.4.1.1.1 1
M.canetti;lineage1 1
lineage4.2;lineage4.6.3;lineage4.9 1
M.canetti;lineage4.9 1
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
lineage1.2.2.2;lineage2.2.1 1
La1.7.X-unk4;lineage4.9 1
lineage2.2.1;lineage4 1
lineage2.2.1.2 1
spoligotype Counts
spoligotype Count
None 234
Geographic prevalence
Country level data for this variant is available for 43 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4799338 Pre-XDR-TB lineage2.2.1 in
ERR363506 Sensitive lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR9119669 MDR-TB lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR4818536 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR373946 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR4831839 MDR-TB lineage2.2.1 None
SRR25827764 Pre-XDR-TB lineage2.2.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR6359066 HR-TB lineage4.9 None
ERR4799379 Pre-XDR-TB lineage2.2.1 in
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR4811030 Other lineage4.9 None
ERR349299 Other lineage4.9 None
ERR4799875 Pre-XDR-TB lineage2.2.1 in
ERR4796722 Pre-XDR-TB lineage2.2.1 in
ERR4800431 Pre-XDR-TB lineage2.2.1 in
ERR405209 Sensitive La1.7;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4830661 Pre-XDR-TB lineage2.2.1 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR323037 Other lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
SRR1172885 HR-TB lineage4.9 None
SRR25827435 XDR-TB lineage2.2.1.1 None
ERR736831 Other lineage4.9 None
ERR4797971 XDR-TB lineage2.2.1 in
ERR323108 HR-TB La1.7;lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
ERR4812155 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR369160 Sensitive lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR3675222 Other La1.7 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR4799471 Pre-XDR-TB lineage2.2.1 in
SRR2010299 MDR-TB lineage2.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR28045927 XDR-TB lineage2.2.1 None
ERR4796577 HR-TB None
SRR28351359 Pre-XDR-TB lineage2.2.1 None
SRR28044873 Pre-XDR-TB lineage3 None
ERR349300 Other lineage4.9 None
ERR400529 Other lineage3 None
ERR11049819 Pre-XDR-TB lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
ERR4799830 XDR-TB lineage2.2.1 in
ERR4796375 Pre-XDR-TB lineage2.2.1 in
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR1175496 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR4798605 XDR-TB lineage2.2.1 in
SRR1792478 HR-TB La1.7.1 None
ERR4798509 Pre-XDR-TB lineage2.2.1;lineage3.1.2 in
SRR6045832 Other lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR11466044 Other lineage4.1.1.3 None
ERR387051 RR-TB lineage4.9 None
ERR176741 Other lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
ERR369163 Other lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR4800321 XDR-TB lineage2.2.1 in
ERR4799508 XDR-TB lineage2.2.1 in
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR4799637 Pre-XDR-TB lineage2.2.1 in
ERR11049830 Pre-XDR-TB lineage2.2.1 None
SRR20969542 Other lineage4.4.2 None
SRR12708414 HR-TB lineage2.2.1 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1175508 Sensitive lineage4.9 None
SRR22175203 Pre-XDR-TB lineage2.2.1 None
ERR4811031 Other lineage4.5 None
ERR4799187 Pre-XDR-TB lineage2.2.1 in
SRR12708411 HR-TB lineage1.2.2.2 None
ERR349264 Other lineage4.9 None
ERR4800293 Pre-XDR-TB lineage2.2.1 in
SRR5341323 Sensitive lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR4798617 XDR-TB lineage2.2.1 in
SRR6045371 Other lineage4.9 None
ERR363498 Other lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR6045706 Other lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR3797081 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR4819462 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
ERR363453 Other lineage4.9 None
ERR4798762 Pre-XDR-TB lineage2.2.1 in
SRR21677886 Sensitive lineage4.9 None
ERR4799219 Pre-XDR-TB lineage2.2.1 in
ERR363447 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR4798457 XDR-TB lineage2.2.1 in
ERR11465511 Other lineage4.3.4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4798804 Pre-XDR-TB lineage2.2.1 in
ERR4797622 Pre-XDR-TB lineage1.1.2;lineage2.2.1 in
SRR1238558 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR6045503 Other lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR363446 Other lineage4.9 None
SRR28351319 Pre-XDR-TB lineage2.2.1 None
SRR28045562 Pre-XDR-TB lineage2.2.1 None
SRR28351615 Pre-XDR-TB lineage2.2.1 None
SRR12708416 Sensitive None
ERR245675 Sensitive lineage1.1.2 None
ERR369162 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR4799229 Pre-XDR-TB lineage2.2.1 in
ERR363421 Other lineage4.9 None
ERR4796525 Pre-XDR-TB lineage2.2.1 in
ERR4797390 MDR-TB lineage2.2.1 in
SRR8380939 Pre-XDR-TB lineage2.2.1 in
SRR3675492 Other La1.7;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4799385 Pre-XDR-TB lineage2.2.1 in
ERR216965 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR400345 Other lineage4.9 None
ERR4797384 Pre-XDR-TB lineage2.2.1 in
ERR349330 Sensitive lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR4798668 Pre-XDR-TB lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
SRR3675582 Other lineage4.9 None
ERR11465801 Other lineage4.3.4.1 None
SRR15014655 Other M.canetti;lineage1 None
ERR400326 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
ERR4796335 Pre-XDR-TB lineage2.2.1 in
ERR4797111 Pre-XDR-TB lineage2.2.1 in
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR363490 Other lineage4.9 None
ERR4800332 Pre-XDR-TB lineage2.2.1 in
ERR4769444 HR-TB lineage4.9 None
SRR22175191 Pre-XDR-TB lineage2.2.1 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR4799526 Pre-XDR-TB lineage2.2.1 in
SRR25827482 XDR-TB lineage2.2.1 None
ERR3797086 Sensitive lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR25827704 XDR-TB lineage2.2.1 None
ERR4796702 Pre-XDR-TB lineage2.2.1 in
ERR369156 Sensitive lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR373947 Other lineage4.9 None
ERR4796894 XDR-TB lineage2.2.1 in
ERR363500 Other lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR363479 Other lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4796984 Pre-XDR-TB lineage2.2.1 in
ERR369159 Other lineage4.9 None
ERR4799432 Pre-XDR-TB lineage2.2.1 in
ERR4814683 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
SRR28351362 Pre-XDR-TB lineage2.2.1 None
SRR8692887 Other None
SRR8692905 Sensitive None
SRR28351283 Pre-XDR-TB lineage1.2.2.2;lineage2.2.1 None
SRR28409566 Pre-XDR-TB lineage2.2.1 None
SRR28351354 XDR-TB lineage2.2.1 None
SRR28351230 Pre-XDR-TB lineage2.2.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR11465351 Sensitive lineage4.1.2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR363449 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4830913 Pre-XDR-TB lineage2.2.1 np
ERR2513724 Sensitive lineage4.3.2.1 None
ERR6359070 Sensitive lineage4.9 None
ERR4796746 Pre-XDR-TB lineage2.2.1 in
ERR369158 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR4799288 Pre-XDR-TB lineage2.2.1 in
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4799909 Pre-XDR-TB lineage2.2.1 in
ERR4800504 Pre-XDR-TB lineage2.2.1 in
ERR4799416 Pre-XDR-TB lineage2.2.1 in
ERR4830662 Pre-XDR-TB lineage2.2.1 np