EBG00000313339 - n.1822C>T
Drug resistance types
52 Sensitive
2 RR-TB
32 HR-TB
14 MDR-TB
60 Pre-XDR-TB
14 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 76 |
| lineage4.9 | 91 |
| lineage4.3.3 | 3 |
| lineage4.3.4.2.1 | 4 |
| lineage4.3.2.1 | 3 |
| lineage2.2.2 | 1 |
| lineage4.3.4.1 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | 1 |
| 4 | |
| lineage1.1.2;lineage2.2.1 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4.1.1.3 | 3 |
| La1.7;lineage4.3.4.1 | 1 |
| La1.7;lineage4.9 | 7 |
| lineage4.4.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| lineage2.2 | 1 |
| La1.7.1 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.4.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.5 | 1 |
| M.canetti;lineage1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3 | 2 |
| lineage2.2.1;lineage3.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.7 | 1 |
| lineage4.4.1.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage1.2.2.2;lineage2.2.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 241 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4830662 | Pre-XDR-TB | lineage2.2.1 | np | ERR363506 | Sensitive | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4800321 | XDR-TB | lineage2.2.1 | in | ERR4799508 | XDR-TB | lineage2.2.1 | in | ERR4799637 | Pre-XDR-TB | lineage2.2.1 | in | ERR349265 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | SRR25827764 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798668 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675582 | Other | lineage4.9 | None | ERR11465801 | Other | lineage4.3.4.1 | None | ERR4811030 | Other | lineage4.9 | None | ERR4799187 | Pre-XDR-TB | lineage2.2.1 | in | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR4796335 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798617 | XDR-TB | lineage2.2.1 | in | SRR6045371 | Other | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | ERR4830661 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4799526 | Pre-XDR-TB | lineage2.2.1 | in | SRR12708392 | Other | lineage2.2.1 | None | ERR4798457 | XDR-TB | lineage2.2.1 | in | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR4799471 | Pre-XDR-TB | lineage2.2.1 | in | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4796984 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799432 | Pre-XDR-TB | lineage2.2.1 | in | ERR363446 | Other | lineage4.9 | None | ERR4814683 | Sensitive | lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | None | SRR28351362 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351319 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | None | SRR29772647 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797622 | Pre-XDR-TB | lineage1.1.2;lineage2.2.1 | in | ERR4799416 | Pre-XDR-TB | lineage2.2.1 | in | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR13261997 | Pre-XDR-TB | lineage2.2.1 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR369162 | Other | lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR4796375 | Pre-XDR-TB | lineage2.2.1 | in | ERR373945 | Other | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR4796746 | Pre-XDR-TB | lineage2.2.1 | in | ERR369158 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR4799385 | Pre-XDR-TB | lineage2.2.1 | in | ERR11466044 | Other | lineage4.1.1.3 | None | ERR176741 | Other | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR4797384 | Pre-XDR-TB | lineage2.2.1 | in | SRR20969542 | Other | lineage4.4.2 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR11662694 | Other | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR4799379 | Pre-XDR-TB | lineage2.2.1 | in | SRR1175508 | Sensitive | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR400326 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR25827435 | XDR-TB | lineage2.2.1.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR4797971 | XDR-TB | lineage2.2.1 | in | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR4800332 | Pre-XDR-TB | lineage2.2.1 | in | ERR2851356 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4798762 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827482 | XDR-TB | lineage2.2.1 | None | ERR363447 | Other | lineage4.9 | None | ERR4796702 | Pre-XDR-TB | lineage2.2.1 | in | ERR369156 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR6045503 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR28045927 | XDR-TB | lineage2.2.1 | None | SRR28045562 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796577 | HR-TB | None | SRR28351615 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR13290868 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772556 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045832 | Other | lineage4.9 | None | ERR11049830 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266931 | MDR-TB | lineage2.2.1 | None | ERR13266996 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796722 | Pre-XDR-TB | lineage2.2.1 | in | SRR3675210 | Sensitive | lineage4.9 | None | ERR4798804 | Pre-XDR-TB | lineage2.2.1 | in | ERR363449 | Other | lineage4.9 | None | ERR400529 | Other | lineage3 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR11465351 | Sensitive | lineage4.1.2.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4830913 | Pre-XDR-TB | lineage2.2.1 | np | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR4796525 | Pre-XDR-TB | lineage2.2.1 | in | ERR349296 | Sensitive | lineage4.9 | None | ERR4798605 | XDR-TB | lineage2.2.1 | in | SRR8380939 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798509 | Pre-XDR-TB | lineage2.2.1;lineage3.1.2 | in | ERR4799909 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4799338 | Pre-XDR-TB | lineage2.2.1 | in | ERR387051 | RR-TB | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR22175203 | Pre-XDR-TB | lineage2.2.1 | None | ERR349299 | Other | lineage4.9 | None | ERR4799875 | Pre-XDR-TB | lineage2.2.1 | in | ERR349264 | Other | lineage4.9 | None | ERR4800293 | Pre-XDR-TB | lineage2.2.1 | in | SRR5341323 | Sensitive | lineage4.9 | None | ERR4797111 | Pre-XDR-TB | lineage2.2.1 | in | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR323037 | Other | lineage4.9 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR22175191 | Pre-XDR-TB | lineage2.2.1 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR363453 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4799219 | Pre-XDR-TB | lineage2.2.1 | in | ERR3797086 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR25827704 | XDR-TB | lineage2.2.1 | None | SRR3675222 | Other | La1.7 | None | ERR4796894 | XDR-TB | lineage2.2.1 | in | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR369159 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR8692887 | Other | None | SRR8692905 | Sensitive | None | SRR28351283 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | SRR28409566 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351354 | XDR-TB | lineage2.2.1 | None | SRR28351359 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351230 | Pre-XDR-TB | lineage2.2.1 | None | ERR369163 | Other | lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR13262011 | XDR-TB | lineage2.2.1 | None | ERR349300 | Other | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR4800431 | Pre-XDR-TB | lineage2.2.1 | in | ERR363499 | Other | lineage4.9 | None | ERR11049819 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799830 | XDR-TB | lineage2.2.1 | in | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR4799229 | Pre-XDR-TB | lineage2.2.1 | in | ERR400320 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4797390 | MDR-TB | lineage2.2.1 | in | ERR4799288 | Pre-XDR-TB | lineage2.2.1 | in | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4800504 | Pre-XDR-TB | lineage2.2.1 | in |
|---|
