EBG00000313339 - n.3035T>A
Drug resistance types
25 Sensitive
2 RR-TB
22 HR-TB
8 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.2.BCG | 2 |
| lineage4.9;lineage7 | 2 |
| lineage4.9 | 36 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.7;lineage4.9 | 10 |
| La3;lineage4.9 | 8 |
| lineage4.4.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1 | 4 |
| lineage2.2.1.1 | 1 |
| lineage4.6.1.1 | 2 |
| M.canetti;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La1.7 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.1;lineage4.9 | 2 |
| La2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.8.1 | 3 |
| lineage6 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 86 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1915487 | Other | La1.2.BCG | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR970441 | RR-TB | lineage2.2.1.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR6866807 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR3797029 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR3797019 | Other | La1.8.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9787030 | Sensitive | lineage6 | None | ERR926163 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR3797073 | Other | La1.8.1 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR7240033 | Other | La1.8.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None |
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