lineage | Count |
---|---|
30 | |
lineage2.2.1 | 4 |
lineage4.9.1 | 1 |
lineage4 | 29 |
lineage4.9 | 57 |
lineage4.7 | 1 |
lineage4.8.1 | 1 |
lineage4.1.2.1 | 2 |
lineage4.3.4.2.1 | 1 |
La1 | 1 |
lineage4;lineage3.1 | 1 |
La1.2 | 2 |
La1.3 | 1 |
lineage2.2 | 2 |
lineage4.3.4 | 1 |
lineage3 | 3 |
lineage4.3.4.2 | 1 |
lineage4.8 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
lineage4.1.1.3 | 1 |
La1.8.1 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.9;La1 | 1 |
lineage4;lineage2 | 1 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 148 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046492 | Other | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR323045 | HR-TB | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3797015 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4188247 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769552 | Other | La1.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR6358979 | Other | None | ERR4811493 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736848 | HR-TB | None | ERR736837 | Other | lineage4.9 | None | ERR736835 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9786076 | Sensitive | lineage3 | None | SRR1175513 | Other | lineage4.9 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR13591342 | HR-TB | lineage4.1.1.3 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR14782405 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | ERR176778 | HR-TB | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR23961549 | Other | La1.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | ERR176651 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | SRR5341408 | Sensitive | lineage3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | ERR4819051 | Other | lineage4 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341456 | Other | None | SRR5341330 | HR-TB | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None |
---|