Rv0682 - c.195G>T
Drug resistance types
38 Sensitive
0 RR-TB
19 HR-TB
10 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.9 | 48 |
| 1 | |
| lineage2.2.1 | 6 |
| La1.7;lineage4.9 | 7 |
| lineage5.2 | 4 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.7.1 | 1 |
| La1.7 | 2 |
| lineage4 | 4 |
| La3;lineage4.3.4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| lineage4.5 | 1 |
| lineage2.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.1.2.1 | 2 |
| lineage3 | 1 |
| lineage4.9;lineage9 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 94 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR13267017 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR4830353 | Other | La1.7 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR9119499 | MDR-TB | lineage5.2 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4872093 | MDR-TB | lineage5.2 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR3675522 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR6358979 | Other | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None |
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