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SRA data
Rv3457c
- c.-618_-617delTGinsGC
Drug resistance types
39 Sensitive
0 RR-TB
26 HR-TB
8 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
58
La1.7;lineage4.9
7
lineage4.1.1.3;lineage4.9
2
lineage2.2.1
2
La1.7;lineage4.9;lineage7
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
M.canetti;lineage4.9
2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
1
1
lineage5.1.4
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
95
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034634
HR-TB
lineage4.9
None
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063849
HR-TB
lineage4.9
None
ERR1063857
MDR-TB
La2;lineage4.9
None
ERR1063858
HR-TB
lineage4.9
None
ERR1063859
HR-TB
La1.7.1;lineage4.9
None
ERR1063862
HR-TB
lineage4.9
None
ERR108471
HR-TB
lineage4.9
None
ERR176651
Other
lineage4.9
None
ERR176778
HR-TB
lineage4.9
None
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