Rv0001 - c.687C>T
Drug resistance types
16 Sensitive
0 RR-TB
11 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage4.9 | 21 |
| lineage4 | 1 |
| La1.2.BCG | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| 1 | |
| lineage2.2.1 | 6 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage5.1.4 | 1 |
| La1.7.1 | 1 |
| lineage4.2.1 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 50 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR12708416 | Sensitive | None | SRR6045795 | Other | lineage2.2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR6046046 | Other | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR4811030 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR18500589 | Other | lineage2.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR6046245 | Other | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR9119669 | MDR-TB | lineage4.9 | None | SRR21690120 | Sensitive | lineage2.2.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR9970978 | Other | La1;lineage4.1.2 | None |
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