Rv0001 - c.687C>T


Drug resistance types
16 Sensitive 0 RR-TB 11 HR-TB 2 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 20 Other
lineage Counts
lineage Count
lineage4.9 21
lineage1;lineage4.9 1
lineage2.2.1 6
La1.7;lineage4.9 4
1
La1.2.BCG 1
lineage4.2.1 1
lineage4.5 1
La1;lineage4.9 1
lineage4.4.1.1 1
lineage4.9;lineage9 1
lineage4.1;lineage4.9 1
lineage4.3.3 1
lineage5.1.4 1
lineage4 1
lineage4.1.1.3;lineage4.9 1
lineage2.2.1;lineage4 1
La1.7.1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.6.3;lineage4.9 1
La1;lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 50
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045555 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR18500589 Other lineage2.2.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR12708416 Sensitive None
SRR6045795 Other lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
ERR400320 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR9119669 MDR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR4811030 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR108471 HR-TB lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR6046485 Other lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6045053 Other lineage4 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR1792478 HR-TB La1.7.1 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6046133 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
SRR21690120 Sensitive lineage2.2.1 None
SRR3675580 Sensitive lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
SRR6044819 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR6046245 Other lineage4.9 None