Rv0006 - c.1761C>G
Drug resistance types
21 Sensitive
3 RR-TB
143 HR-TB
12 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
71 Other
lineage Counts
| lineage | Count |
|---|---|
| 134 | |
| lineage4 | 22 |
| lineage4.3.4.2.1 | 2 |
| La1 | 2 |
| lineage4.1.3 | 2 |
| lineage4.1.2.1 | 12 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage4.9 | 15 |
| lineage2 | 3 |
| lineage3 | 2 |
| lineage2.2 | 4 |
| lineage2.2.1 | 7 |
| lineage4.8;La3 | 1 |
| lineage1.2.1.2.1 | 11 |
| lineage4.3.4 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.2 | 1 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.8 | 1 |
| lineage6.1.3 | 1 |
| lineage6.3.1 | 1 |
| lineage3.1 | 3 |
| lineage4.5 | 2 |
| lineage4.3.3 | 2 |
| lineage7;lineage2.2.1.2 | 1 |
| La1.7.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.1 | 2 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.2.1 | 1 |
| lineage1.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.2.1;lineage1.1.2 | 1 |
| lineage4.7 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 254 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1063858 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283010 | Other | La1 | None | ERR5336148 | Other | None | ERR3283036 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3468544 | HR-TB | None | ERR363456 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR363509 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797046 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797036 | HR-TB | None | ERR3797069 | Other | None | ERR4188350 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4407463 | HR-TB | None | ERR4769452 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4800341 | Other | lineage3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4810741 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR736867 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR6336767 | Sensitive | lineage1.2.1.2.1 | None | ERR6358991 | HR-TB | None | ERR702406 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736848 | HR-TB | None | ERR736874 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9117709 | HR-TB | None | SRR21733056 | RR-TB | lineage1.2.1.2.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787197 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1172951 | Other | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1173788 | Other | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR13423544 | Other | lineage4.5 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR14782405 | HR-TB | None | SRR13861372 | Other | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR19303884 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969605 | Other | lineage2.2.1 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR6325445 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR1035239 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675311 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | ERR176751 | HR-TB | None | SRR7496548 | Sensitive | lineage1.2.1.2.1 | us | SRR3675503 | Sensitive | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR212001 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212034 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675558 | HR-TB | None | SRR7496506 | Sensitive | lineage1.2.1.2.1 | us | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR7496537 | Sensitive | lineage1.2.1.2.1 | us | ERR2446566 | Other | lineage4.1 | None | SRR7496472 | Other | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | SRR5341302 | HR-TB | None | SRR5007188 | Other | lineage4 | None | SRR2100422 | Sensitive | lineage1.2.1.2.1 | None | SRR5341456 | Other | None | ERR1035138 | MDR-TB | None | ERR400418 | Sensitive | lineage1.2.1.2.1 | gb | SRR6152963 | Sensitive | lineage1.2.1.2.1 | ca | SRR6153136 | HR-TB | lineage1.2.1.2.1 | ca | SRR5535933 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5341333 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | ERR278594 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6045010 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6046046 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | ERR3256141 | HR-TB | lineage1.2.1.2.1 | ph | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6046397 | Other | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR3256173 | Sensitive | lineage1.2.1.2.1 | ph | ERR323034 | HR-TB | lineage3.1 | None | ERR3077978 | Other | lineage1.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325442 | HR-TB | None | ERR4814332 | Sensitive | lineage2.2.1.2 | gb | ERR4800221 | HR-TB | lineage2.2.1;lineage1.1.2 | in | ERR4831117 | HR-TB | None | ERR294248 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR5311099 | HR-TB | None | SRR6789626 | Other | None | ERR4817077 | Sensitive | lineage2.2.1 | gb | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR323041 | HR-TB | None | SRR7496509 | Other | None | SRR7496517 | Other | None | SRR7496523 | Other | lineage4.7 | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR1035157 | Other | lineage4.9 | None | ERR1034634 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None |
|---|
