Rv0006 - c.405C>G
Drug resistance types
22 Sensitive
2 RR-TB
21 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 2 |
| lineage4.9 | 24 |
| La1;lineage2;lineage4.9 | 1 |
| La1;lineage4.9 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage1.1.3.1 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.2.1 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.5 | 2 |
| lineage4.9;lineage7 | 1 |
| 1 | |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.8 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.4.2 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR13285191 | Sensitive | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR11049890 | Sensitive | lineage4.5 | None | SRR26159035 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR13285192 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR387051 | Other | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4812383 | Sensitive | lineage4.3.3 | None | ERR2179754 | Sensitive | lineage4.4.2 | cn | SRR6045892 | Sensitive | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1792478 | HR-TB | La1.7.1 | None |
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