lineage | Count |
---|---|
lineage4 | 43 |
lineage2.2.1 | 5 |
37 | |
La1.7.1 | 1 |
lineage2.2 | 5 |
La1.8.1 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.9 | 13 |
lineage4.3.4.2.1 | 1 |
lineage1.1.2 | 1 |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1.2.1 | 2 |
La1.2 | 1 |
lineage4.3.4 | 1 |
lineage1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 115 |
ID | Drug resistance | Lineage | Country iso2 | SRR8692790 | RR-TB | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR176779 | HR-TB | None | SRR8692782 | Other | lineage4.9 | None | ERR176778 | HR-TB | None | SRR5341387 | Other | lineage4 | None | ERR181887 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR176651 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341456 | Other | None | SRR5341467 | Other | lineage4 | None | SRR6045892 | Sensitive | None | SRR5341469 | Other | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046492 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323045 | HR-TB | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR1063896 | Sensitive | None | ERR323108 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR3283032 | HR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797264 | Sensitive | None | ERR4799025 | Pre-XDR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR751326 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | SRR1158918 | Sensitive | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None |
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