Rv0668 - c.1014C>G
Drug resistance types
8 Sensitive
5 RR-TB
116 HR-TB
31 MDR-TB
37 Pre-XDR-TB
1 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 6 |
| lineage2.2.1.1 | 2 |
| 58 | |
| lineage4 | 15 |
| lineage2.2.2 | 18 |
| lineage2.2.1 | 40 |
| lineage4.5 | 5 |
| lineage4.9 | 31 |
| lineage2.2 | 29 |
| lineage4.6.2.2 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage4.3.4 | 1 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage4;lineage2.2.2 | 1 |
| lineage4.4.2 | 2 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.9;lineage2 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.6.1 | 1 |
| La1.6 | 1 |
| La3 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3 | 1 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 234 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02360577 | HR-TB | lineage3 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR5341456 | Other | None | ERR4819462 | Other | lineage4 | None | SRR5341330 | HR-TB | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820586 | Other | lineage3 | gb | SAMN02360585 | HR-TB | lineage4.5 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6045519 | HR-TB | None | SRR6045053 | Other | None | ERR2660539 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046046 | Other | None | SRR6046299 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6046362 | HR-TB | None | ERR4830353 | Other | None | SRR6046878 | HR-TB | lineage4 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6046460 | HR-TB | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323045 | HR-TB | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063858 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3439265 | Other | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR387051 | HR-TB | None | ERR405191 | Other | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4796577 | MDR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR736839 | Other | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR752229 | Other | lineage4.5 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786507 | Sensitive | lineage4.7 | None | ERR9786843 | Other | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | ERR990545 | Other | lineage3 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013598 | HR-TB | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013599 | HR-TB | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013614 | HR-TB | lineage2.2 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013617 | MDR-TB | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013612 | HR-TB | lineage4 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013618 | MDR-TB | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1013634 | MDR-TB | lineage2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048885 | MDR-TB | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048983 | HR-TB | None | SRR1048982 | HR-TB | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048988 | HR-TB | lineage2.2 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049027 | Pre-XDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049041 | MDR-TB | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1062927 | MDR-TB | lineage4.6.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1167384 | Other | lineage4 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1169249 | Other | La3 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1169306 | Other | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR11972438 | HR-TB | lineage1.1.1 | None | SRR1183049 | Other | lineage2.2 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR18511647 | Sensitive | lineage2.2.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675488 | HR-TB | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR3675222 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675270 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675501 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | ERR4814976 | Other | lineage4.9 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SRR3675510 | Other | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675555 | HR-TB | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR212125 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR4816656 | HR-TB | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818929 | HR-TB | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR4818536 | Other | lineage4.9 | None |
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