Rv0668 - c.1014C>G


Drug resistance types
16 Sensitive 17 RR-TB 92 HR-TB 26 MDR-TB 15 Pre-XDR-TB 3 XDR-TB 53 Other
lineage Counts
lineage Count
lineage2.2.1 36
lineage4.3.2.1 1
lineage4.9 57
La3;lineage4.9 6
lineage2.2.2 21
lineage4.9;lineage6.1.3 1
lineage2.2.1;lineage2.2.2 4
La1.7;lineage4.9 7
lineage2 1
La1.7;M.canetti;lineage4.9 2
lineage2.2.1;lineage4 3
lineage2.2.2;lineage4.9 1
lineage4.7 1
lineage4.1.1.3 2
La1.7.1;lineage4.9 1
lineage4 4
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.9;lineage7 4
M.canetti;lineage2.2.2;lineage6.2 2
lineage6.1.3 1
lineage4.4.1.2 1
lineage2.2.2;lineage4 5
lineage2.2 2
lineage4.3.4 1
La1.2 2
lineage3.1.2.1 1
lineage3 5
lineage2.1;lineage4.9 1
lineage2.2;lineage4.9 1
lineage4.1;lineage4.8 2
lineage4.4.2 1
lineage4.6.2.2 2
lineage4.6.1.2 4
lineage1;lineage4.9 1
lineage2.2.1.1 2
M.canetti;lineage4.2;lineage4.9 1
lineage4.1.2.1 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.2;lineage4 2
lineage2;lineage4.9 2
La1.7 2
M.canetti;lineage2.2 2
3
La3;lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La2;lineage2.2 1
lineage4.5 4
La2;lineage4.9 1
M.canetti;lineage4.9 2
La1.7.1;La1.7.X-unk4 1
lineage4.6.1.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage4.2;lineage4.9 1
lineage2.2.1.1;lineage4 1
lineage2.1;lineage4.9;lineage7 1
lineage4.3.4.2.1 1
La1.7.X-unk4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 222
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1013614 Sensitive lineage2.2.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR181887 Other lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SAMN02360586 HR-TB lineage2.2.1 None
SRR1169306 Other La3;lineage4.9 None
SRR1013633 MDR-TB lineage2.2.2 None
ERR176643 Other La3;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR1048869 HR-TB lineage2.2.1;lineage2.2.2 None
ERR9029360 MDR-TB lineage2.2.1 None
ERR176778 HR-TB lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR1049040 HR-TB lineage2 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SRR1048998 HR-TB lineage2.2.1 None
SAMN02360574 HR-TB lineage2.2.1 None
SRR1013584 HR-TB lineage2.2.2 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SRR1013617 Sensitive lineage2.2.1;lineage4 None
ERR736875 HR-TB lineage4.9 None
SRR1049027 HR-TB lineage2.2.2;lineage4.9 None
ERR9786507 RR-TB lineage4.7 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR176779 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR1063858 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR1013610 Sensitive lineage4 None
SRR1049007 HR-TB lineage2.2.2 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1165628 Other La3;lineage4.9 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR12708392 Other lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1023236 Other lineage6.1.3 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR212125 HR-TB lineage4.9 None
ERR7821163 Other lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR1144744 HR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR1048966 MDR-TB lineage2.2.1 None
ERR181824 MDR-TB lineage4.9 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR1013604 HR-TB lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR23961549 Other La1.2 None
ERR4769493 Other lineage4.9 None
SRR1048965 HR-TB lineage2.2.1 None
ERR212033 Other lineage4.9 None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR3675501 Other La1.7;lineage4.9 None
SRR18511647 Sensitive lineage2.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR387051 RR-TB lineage4.9 None
SRR1013621 Pre-XDR-TB lineage2.2.2 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
ERR4799547 HR-TB lineage2.2.1 None
ERR990545 RR-TB lineage3 None
SRR1049004 HR-TB lineage2.2.2 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR1049026 HR-TB lineage2.2;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR1013603 HR-TB lineage2.2.1 None
SAMN02360590 MDR-TB lineage2.2.2 None
SRR20969542 Other lineage4.4.2 None
SRR3675461 RR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR15315797 RR-TB lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR323045 HR-TB lineage1;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR1048982 HR-TB lineage2.2.1.1 None
SRR1048993 HR-TB lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1013608 Sensitive lineage2.2.2 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR1048870 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
ERR108471 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR1181289 RR-TB lineage2.2.1 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR6044875 Other lineage4.9 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR21677886 Sensitive lineage4.9 None
SRR1048992 HR-TB lineage2.2;lineage4 None
SRR1048853 HR-TB lineage2;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
ERR3283040 HR-TB lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1048969 HR-TB lineage2.2.1;lineage2.2.2 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR1013618 RR-TB lineage2.2.1;lineage4 None
SRR1013597 Sensitive lineage2.2.2;lineage4 None
SRR1013553 MDR-TB lineage2.2.2 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SRR6045053 Other lineage4 None
ERR11252612 Other La3;lineage4.9 None
ERR4796577 HR-TB None
ERR6866807 RR-TB lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR176651 Other lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR4769427 Other La1.2 None
SAMN02360583 HR-TB lineage2.2.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4818929 HR-TB lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR1013596 Sensitive lineage3 None
SRR1013612 Sensitive lineage4.5 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4820773 HR-TB lineage4.9 None
SRR1048994 HR-TB lineage4.9 None
SRR1047993 HR-TB lineage2.2.1 None
ERR4816322 Other lineage4.9 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1167384 Other La3;lineage4.9 None
SAMN02360581 HR-TB lineage2.2.1 None
SRR1048996 Sensitive lineage4.5 None
SRR1048985 HR-TB lineage2.2.1 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1013609 Sensitive lineage4 None
ERR4872269 XDR-TB lineage2.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1048987 HR-TB lineage2.2.1 None
ERR4769521 RR-TB lineage4.9 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR1048885 HR-TB lineage2.2;lineage4 None
SRR11662694 Other lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR1175052 HR-TB lineage4.9 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
ERR1063849 HR-TB lineage4.9 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
ERR1063862 HR-TB lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR1013554 MDR-TB lineage2.2.2;lineage4 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1013629 Pre-XDR-TB lineage2.2.2 None
SRR1172885 HR-TB lineage4.9 None
SRR1048975 HR-TB lineage2.2.1 None
ERR4816478 HR-TB lineage4 None
SAMN02360577 HR-TB lineage3 None
ERR4830353 HR-TB La1.7 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4816656 Other lineage4.9 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
ERR4769452 Other lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1048981 HR-TB lineage3 None
SRR1013599 HR-TB lineage2.2.1.1;lineage4 None
SRR1180446 Other lineage4.9 None
SRR1049006 HR-TB lineage2.2.2;lineage4 None
ERR4819241 Other lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SAMN02360585 HR-TB lineage4.5 None
SRR1013622 Pre-XDR-TB lineage2.2.2 None
SRR1049023 HR-TB lineage4.9 None
ERR9786843 Other None
ERR11252736 Other lineage4.9 None
ERR212001 HR-TB None
SRR1013607 HR-TB lineage2.2.2 None
ERR752229 Other lineage4.5 None
SRR1013602 HR-TB lineage2.2.1 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013634 MDR-TB lineage2.2.2 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR1048991 HR-TB lineage2;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1180440 Other lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR1013577 HR-TB lineage2.2.2 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1048980 HR-TB lineage3 None
SRR1013613 Sensitive lineage2.2.1 None
SRR3675270 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR1013598 Sensitive lineage2.2.2;lineage4 None
ERR3283055 HR-TB lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None