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SRA data
Rv0006
- c.-596G>A
Drug resistance types
94 Sensitive
13 RR-TB
84 HR-TB
47 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
82 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
125
M.canetti;lineage2.1;lineage4.9
24
lineage2.2.1
13
La3;M.canetti;lineage2.1;lineage4.9
11
lineage4.1.2.1
7
6
M.canetti;lineage2.1;lineage4.9;lineage6.3
6
lineage4
6
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
5
lineage4.3.3
4
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
321
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR067699
Sensitive
La1;lineage2;lineage4.9
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1035122
Sensitive
lineage4.9
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR1063862
HR-TB
lineage4.9
None
ERR1063883
HR-TB
lineage4.9
None
ERR1063896
Sensitive
None
ERR108471
HR-TB
lineage4.9
None
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