lineage | Count |
---|---|
lineage2.2.1 | 2 |
lineage4.9 | 12 |
La1.7.X-unk4;lineage4.9 | 1 |
La1.2;La1.8.1 | 1 |
La3;lineage4.9 | 8 |
lineage4.9;lineage7 | 3 |
lineage2.1;lineage4.9;lineage7 | 1 |
M.canetti;lineage4.9;lineage9 | 1 |
La1.7;lineage4.9 | 4 |
La2;lineage4.9 | 1 |
La3;lineage4.3.4 | 1 |
M.canetti;lineage1 | 1 |
lineage4.9;lineage9 | 1 |
lineage4.9;lineage6.3 | 1 |
lineage2.2.2 | 2 |
La1.7;M.canetti;lineage4.9 | 2 |
lineage2.2 | 1 |
La3;lineage4 | 1 |
La2;lineage2.2 | 1 |
lineage2.1;lineage4.9 | 2 |
M.canetti;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 48 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR161037 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR6866807 | Other | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6824522 | MDR-TB | lineage2.2.2 | cn | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1723437 | MDR-TB | lineage2.2.2 | cn | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR3283028 | Other | La3;lineage4 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None |
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