EBG00000313339 - n.1818C>T


Drug resistance types
68 Sensitive 0 RR-TB 23 HR-TB 4 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 29 Other
lineage Counts
lineage Count
lineage4.9 84
lineage2.2.1 10
lineage4.5 1
M.canetti;lineage4.9;lineage9 1
lineage4.3.3 3
lineage4.1.2.1 3
La2 2
M.canetti;lineage1 1
lineage1.2.2.2 3
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
1
lineage4.1.1.3;lineage4.9 2
lineage4.4.1.1.1 1
lineage4.1;lineage4.9 2
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1;lineage4 1
lineage4.1.1.3 2
lineage2.2.2 1
lineage4.3.2.1 3
lineage1.1.2 1
lineage4.3.4.2.1 1
La1.7;lineage4.9 2
lineage4.4.1.1 1
spoligotype Counts
spoligotype Count
None 128
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341437 Sensitive lineage4.9 None
ERR363447 Other lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4769439 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR12708414 HR-TB lineage2.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR363498 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4178309 Other lineage4.1.2.1 None
ERR9121158 Other La2 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR176741 Other lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR1175508 Sensitive lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR349299 Other lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR5341323 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR4814683 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
ERR363502 Other lineage4.9 None
ERR373947 Other lineage4.9 None
ERR7902603 Sensitive lineage1.2.2.2 None
SRR12708416 Sensitive None
ERR349296 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR363456 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR6045503 Sensitive lineage4.9 None
ERR363500 Sensitive lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR1175496 Sensitive lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR5341296 Sensitive lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR1723888 Sensitive lineage2.2.1 cn
ERR363479 Sensitive lineage4.9 None
ERR216965 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR400326 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR12708372 Sensitive lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
ERR13267616 Sensitive lineage1.2.2.2 None
SRR6045706 Sensitive lineage4.9 None
ERR4195478 Sensitive La2 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR473334 HR-TB lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR8380888 Sensitive lineage1.1.2 in
ERR2513724 Sensitive lineage4.3.2.1 None
ERR369162 Other lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR369163 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR369158 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR4799547 HR-TB lineage2.2.1 None
ERR363421 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR6359066 HR-TB lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR373945 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR363426 Sensitive lineage4.9 None
ERR4831839 MDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR3675209 Sensitive lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR1172885 HR-TB lineage4.9 None