lineage | Count |
---|---|
lineage4.9 | 84 |
lineage2.2.1 | 10 |
lineage4.5 | 1 |
M.canetti;lineage4.9;lineage9 | 1 |
lineage4.3.3 | 3 |
lineage4.1.2.1 | 3 |
La2 | 2 |
M.canetti;lineage1 | 1 |
lineage1.2.2.2 | 3 |
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | 1 |
1 | |
lineage4.1.1.3;lineage4.9 | 2 |
lineage4.4.1.1.1 | 1 |
lineage4.1;lineage4.9 | 2 |
lineage4.2.1.1;lineage4.3.3 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage4.1.1.3 | 2 |
lineage2.2.2 | 1 |
lineage4.3.2.1 | 3 |
lineage1.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
La1.7;lineage4.9 | 2 |
lineage4.4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 128 |
ID | Drug resistance | Lineage | Country iso2 | SRR5341437 | Sensitive | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR9121158 | Other | La2 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR176741 | Other | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR349299 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR4814683 | Sensitive | lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | None | ERR363502 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR7902603 | Sensitive | lineage1.2.2.2 | None | SRR12708416 | Sensitive | None | ERR349296 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR1723888 | Sensitive | lineage2.2.1 | cn | ERR363479 | Sensitive | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR400326 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR13267616 | Sensitive | lineage1.2.2.2 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR4195478 | Sensitive | La2 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR8380888 | Sensitive | lineage1.1.2 | in | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR369162 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR363421 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None |
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