Rv3596c - c.1410A>G


Drug resistance types
58 Sensitive 6 RR-TB 31 HR-TB 17 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 53 Other
lineage Counts
lineage Count
lineage4.9 73
lineage4.6.2.2 8
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.1.2.1 3
lineage2.2.1.2;lineage7 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.8 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.2.1 8
lineage4.9.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.3.4.2 1
La1.8.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2.1;lineage4 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La2;lineage4.9 1
La1.6;La3;lineage4.9 2
lineage4.1;lineage4.8 2
La1.7;lineage3.1;lineage4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage6.1.3 1
lineage2.2.1.1 1
La1.2.BCG 1
2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.2 1
lineage4.3.4.2.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.8.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.1.3 1
La1.7;lineage4.9 3
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
La1;lineage4.9 1
lineage4.6.4;lineage4.9 1
La1.6;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.1.3 1
lineage3 1
lineage4.4.1.1.1 1
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1;lineage4.9 2
lineage1.1.3.3 1
lineage4 1
M.canetti;lineage4.9 1
lineage4.3.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.4.1.2 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 165
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1180312 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR4811447 Sensitive lineage4.6.2.2 None
SRR1175513 Sensitive lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1180391 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
ERR9787006 Sensitive lineage4.6.2.2 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1791747 Other La1.8.1 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR2446566 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR1181283 Sensitive lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
SRR26399265 Other lineage2.2.1 None
SRR1183054 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR9787153 Other lineage6.1.3 None
SRR29017081 Sensitive lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4798262 HR-TB La1.2.BCG None
SRR1180270 Other lineage2.2.1 None
ERR212001 HR-TB None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1180410 Sensitive lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1180375 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR4821655 HR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
ERR11465665 Other lineage4.1.1.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR3283021 HR-TB lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR6046485 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR3283042 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR926155 Sensitive lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR28351347 Other lineage3 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR736848 Other lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR13273112 Sensitive lineage4.6.2.2 None
SRR1184021 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR5341330 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR29097058 Other lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR29096659 Sensitive lineage4.9 None
SRR11662484 MDR-TB lineage1.1.3.3 None
SRR1181349 Sensitive lineage4 None
SRR29096387 Sensitive M.canetti;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR971389 Sensitive lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1023509 Other lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR11082793 Sensitive lineage4.6.2.2 None
SRR1175512 Sensitive lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR9971080 RR-TB lineage2.2.1 None
SRR1180413 Sensitive lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR1183145 Other lineage2.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786843 Other None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR11252664 Other lineage2.2.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
SRR1180355 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
SRR6045555 Other lineage4.9 None