Rv3793 - c.960C>G
Drug resistance types
17 Sensitive
1 RR-TB
33 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.9 | 12 |
| lineage4.9 | 41 |
| M.canetti;lineage1 | 1 |
| lineage2.2.1 | 3 |
| lineage4.4.1.2 | 1 |
| lineage1.1.2 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage2.2 | 4 |
| lineage4 | 2 |
| La1.7;lineage4.9 | 4 |
| lineage4.1.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.8 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.2 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 92 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR1169306 | Other | La3;lineage4.9 | None |
| SRR5341330 | Other | lineage4.9 | None |
| ERR212123 | Other | lineage4.9 | None |
| SRR6045347 | Other | lineage4.9 | None |
| ERR4769450 | Other | lineage4.9 | None |
| ERR4769474 | HR-TB | lineage4.9 | None |
| SRR15014655 | Other | M.canetti;lineage1 | None |
| ERR3283011 | Other | La3;lineage4.9 | None |
| SRR26399265 | Other | lineage2.2.1 | None |
| ERR1063849 | HR-TB | lineage4.9 | None |
| SRR6046594 | Sensitive | lineage4.9 | None |
| ERR323056 | HR-TB | lineage4.4.1.2 | None |
| SRR29096683 | Sensitive | lineage1.1.2 | None |
| SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None |
| SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
| ERR6359082 | Other | lineage4.9 | None |
| SRR5341456 | Other | lineage4.9 | None |
| SRR20970016 | Other | lineage2.2 | None |
| SRR28351339 | MDR-TB | lineage4 | None |
| ERR212033 | Other | lineage4.9 | None |
| ERR212034 | HR-TB | La1.7;lineage4.9 | None |
| SRR19295647 | Sensitive | lineage4.9 | None |
| SRR6045555 | Other | lineage4.9 | None |
| SRR1167384 | Other | La3;lineage4.9 | None |
| ERR1063858 | HR-TB | lineage4.9 | None |
| ERR9786986 | HR-TB | lineage4.1.2.1 | None |
| ERR4810624 | MDR-TB | lineage2.2 | None |
| ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None |
| ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None |
| SRR5535933 | Other | lineage4.9 | None |
| SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None |
| SRR20969708 | HR-TB | lineage2.2 | None |
| SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None |
| SRR6046046 | Other | lineage4.9 | None |
| SRR20969731 | Other | lineage2.2.1 | None |
| SRR6045548 | Sensitive | lineage4.9 | None |
| ERR9786444 | Sensitive | lineage4.8 | None |
| ERR736856 | Sensitive | lineage4.9 | None |
| ERR3283031 | Sensitive | La3;lineage4.9 | None |
| ERR3283047 | Sensitive | La3;lineage4.9 | None |
| ERR3797063 | Sensitive | La3;lineage4.9 | None |
| ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None |
| SRR6046720 | HR-TB | lineage4.9;lineage9 | None |
| ERR3283021 | HR-TB | lineage4.9 | None |
| ERR108471 | HR-TB | lineage4.9 | None |
| SRR14782405 | HR-TB | lineage4.9 | None |
| ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None |
| ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
| SRR6046485 | Other | lineage4.9 | None |
| ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None |
| ERR181824 | HR-TB | lineage4.9 | None |
| ERR3445502 | Sensitive | lineage4.9;lineage7 | None |
| ERR736875 | HR-TB | lineage4.9 | None |
| ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None |
| SRR6046878 | Other | lineage4.9 | None |
| SRR6045795 | Sensitive | lineage2.2.1 | None |
| ERR3445504 | Other | lineage4.9;lineage6.1.3 | None |
| ERR181744 | HR-TB | La3;lineage4.9 | None |
| ERR752229 | Other | lineage4.5 | None |
| SRR5341373 | Other | lineage4.9 | None |
| ERR736817 | HR-TB | lineage4.3.4 | None |
| SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
| ERR323108 | HR-TB | La1.7;lineage4.9 | None |
| SRR1165628 | Other | La3;lineage4.9 | None |
| SRR6046492 | Other | lineage4.9 | None |
| SRR1169249 | Other | lineage4.9 | None |
| ERR1063855 | Other | lineage4.9 | None |
| SRR6046133 | HR-TB | lineage4.9 | None |
| SRR6045219 | HR-TB | lineage4.9 | None |
| ERR161039 | HR-TB | La3;lineage4.3.4 | None |
| ERR216938 | HR-TB | La1.7;lineage4.9 | None |
| ERR161037 | Other | lineage4.9 | None |
| SRR6044876 | Sensitive | lineage4.9 | None |
| SRR29231479 | RR-TB | lineage4.9 | None |
| ERR1063862 | HR-TB | lineage4.9 | None |
| ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
| ERR212138 | HR-TB | lineage4.9 | None |
| ERR3797064 | Other | La3;lineage4.9 | None |
| ERR176643 | Other | La3;lineage4.9 | None |
| ERR176751 | Other | lineage4.9 | None |
| ERR3797046 | HR-TB | lineage4.9 | None |
| ERR4769452 | Other | lineage4.9 | None |
| SRR6044835 | Other | lineage4.9 | None |
| ERR4799513 | HR-TB | lineage2.2 | None |
| ERR3283057 | Sensitive | La3;lineage4.9 | None |
| ERR176560 | HR-TB | La1.7;lineage4.9 | None |
| SRR10808730 | Other | lineage4.9 | None |
| SRR12006550 | Sensitive | lineage1.2.1.2 | None |
| SRR6045217 | Sensitive | lineage4.9 | None |
| ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
| SRR6045053 | Other | lineage4 | None |
| ERR3797048 | Other | La3;lineage4.9 | None |
