lineage | Count |
---|---|
lineage4.9 | 17 |
lineage4.4.2 | 1 |
La1.7;lineage4.9 | 2 |
lineage2.2.1 | 2 |
La1.8.1 | 1 |
lineage3 | 3 |
lineage4.6.1.1 | 1 |
lineage3.1.3 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage4.2.1 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2;lineage4 | 1 |
lineage2.1;lineage4.9 | 1 |
lineage4.1.1.3 | 1 |
lineage4.4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 35 |
ID | Drug resistance | Lineage | Country iso2 | SRR6045359 | Sensitive | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | ERR3078008 | MDR-TB | lineage4.6.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4821276 | Sensitive | lineage3 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR323037 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None |
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