Rv0668 - c.873C>T
Drug resistance types
71 Sensitive
2 RR-TB
64 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 35 |
| 57 | |
| La1.8.1 | 1 |
| lineage4.9 | 51 |
| lineage6.1.1 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage3.1.2 | 1 |
| lineage3 | 3 |
| lineage2.2 | 4 |
| lineage4.5 | 1 |
| lineage2.2.1 | 13 |
| lineage4.1.2.1 | 3 |
| lineage6 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.8 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.3 | 1 |
| lineage2.1 | 1 |
| lineage5.1.4 | 1 |
| lineage4.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| La2 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 197 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798504 | Other | lineage3 | None | ERR4811030 | Sensitive | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4812155 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6358991 | HR-TB | None | ERR5864127 | MDR-TB | lineage2.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736837 | Other | lineage4.9 | None | SRR22251416 | Sensitive | lineage2.2.1 | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR9787030 | Sensitive | lineage6 | None | ERR9119669 | HR-TB | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None | ERR9787153 | Other | lineage6.1.3 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1167384 | Other | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1172310 | HR-TB | None | SRR1169306 | Other | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR13837834 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | SRR3675270 | HR-TB | None | SRR3675265 | Other | lineage4 | None | ERR176643 | HR-TB | None | SRR3675279 | Other | None | ERR176751 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675387 | Sensitive | None | ERR2513259 | Other | lineage3 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212034 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675547 | Other | lineage4.9 | None | ERR212033 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341456 | Other | None | ERR1035138 | MDR-TB | None | ERR2514109 | HR-TB | lineage2.2.1 | None | ERR4819462 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341330 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR5341470 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045053 | Other | None | SRR6046397 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6045399 | Other | None | SRR6046225 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR4798873 | Sensitive | lineage1.2.2.2 | in | ERR4829606 | Sensitive | lineage4.1.2.1 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046878 | HR-TB | lineage4 | None | SRR7496471 | Sensitive | None | ERR4831117 | HR-TB | None | ERR4831638 | Sensitive | None | ERR11465597 | Sensitive | lineage4.1.2.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR323039 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR3283014 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR323053 | HR-TB | None | ERR1063857 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None |
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