EBG00000313339 - n.86C>T
Drug resistance types
7 Sensitive
2 RR-TB
28 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 3 |
| La3;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7;lineage4.9 | 4 |
| La1.2 | 1 |
| lineage4.9 | 22 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.2.1 | 3 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage3 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La2;lineage2.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La3;lineage4.3.4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.9;lineage9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 66 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7517758 | HR-TB | lineage4.1.2 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR7851312 | Other | La1.2 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR7496471 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR867566 | Other | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR181887 | Other | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR161037 | Other | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR15600356 | MDR-TB | lineage2.2.1.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR176651 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR13291940 | Sensitive | lineage4.1.2 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR7517717 | HR-TB | lineage4.1.2 | None | ERR4816417 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR15600385 | MDR-TB | lineage2.2.1.1 | None | SRR10808730 | Other | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR1063858 | HR-TB | lineage4.9 | None |
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