EBG00000313339 - n.86C>T
Drug resistance types
8 Sensitive
2 RR-TB
31 HR-TB
6 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 11 |
| lineage2.2.1.1 | 3 |
| La2 | 1 |
| 20 | |
| lineage4 | 10 |
| lineage1.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.4 | 2 |
| lineage4.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage3 | 4 |
| lineage4.1.2.1 | 4 |
| lineage4.1.1 | 1 |
| lineage2.2.1 | 3 |
| lineage4.7 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.2 | 2 |
| La1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2 | 2 |
| La1.8.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1175052 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR15600356 | MDR-TB | lineage2.2.1.1 | None | SRR13888750 | Other | La2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR15600385 | MDR-TB | lineage2.2.1.1 | None | ERR181744 | HR-TB | None | SRR20632814 | Sensitive | lineage4 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR8025505 | Pre-XDR-TB | lineage2.2.2 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR4815310 | Other | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4815502 | Other | lineage4.1 | None | ERR181824 | HR-TB | lineage4 | None | ERR212123 | Other | None | ERR4815550 | Other | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR212034 | HR-TB | None | ERR4816417 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR4818831 | Other | lineage3 | None | ERR4816470 | Other | lineage3 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR6045480 | Other | lineage4.1.1 | None | ERR1035138 | MDR-TB | None | ERR4817584 | MDR-TB | lineage3 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045124 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR8217918 | HR-TB | None | SRR7496471 | Sensitive | None | SRR7517717 | HR-TB | lineage4.1.2 | None | SRR7517758 | HR-TB | lineage4.1.2 | None | SRR7851312 | Other | La1.2 | None | ERR323045 | HR-TB | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063859 | HR-TB | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4187672 | Other | La1.8.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR4769521 | HR-TB | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR4796577 | MDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866807 | HR-TB | lineage4 | None | SRR10315551 | Sensitive | lineage2.2.1 | None |
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