Rv0005 - c.891T>C


Drug resistance types
60 Sensitive 3 RR-TB 61 HR-TB 9 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 89 Other
lineage Counts
lineage Count
lineage4.9 97
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage2.1;lineage4.9;lineage6.3 6
lineage2.1;lineage4.9 9
lineage2.2 2
M.canetti;lineage2.1;lineage4.9 6
lineage2;lineage4.9 1
lineage2.1;lineage4.3.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage1.1.2 1
lineage2.2.1;lineage4 1
La1.6;La3;lineage4.9 2
lineage2.2.1;lineage4.9 2
lineage2.2.2 1
lineage2.2.1;lineage6.3 1
9
M.canetti;lineage2.2.2;lineage6.2 2
lineage4 3
lineage2.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.4.1.2 1
La1;lineage4.1.2 1
lineage4.9;lineage6.3 5
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.7;lineage4.9 3
lineage4.3.4.2.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2;lineage4.9 1
La3;lineage2.1;lineage6.3 1
La3;lineage4.8 1
lineage4.4.1.1.1 1
La3;lineage2.1;lineage4.9 3
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.8 1
lineage2.2.1 5
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 1
La1.7;lineage3.1;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;lineage4.9 6
La3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
lineage2.2.1.1 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;lineage4 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
lineage4.3.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.1.1.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.1.1 1
lineage1.1.3.1 1
M.canetti;lineage2.1;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.2;lineage4 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 225
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1180345 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR9119669 HR-TB lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR5341310 Other lineage1.1.2 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816999 Other None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1196546 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR4819877 HR-TB lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR702406 Other lineage2.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR349330 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR1180410 Sensitive lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535082 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR1063896 Sensitive None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1175074 Other None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR1169194 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4817667 HR-TB lineage4.8 None
ERR702405 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR369161 Sensitive lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR2027263 Other lineage4 None
SRR1180420 Sensitive lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4814639 HR-TB lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR7535086 Other None
ERR4817731 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR1172817 Other La3 None
SRR5341308 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR6046485 Other lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR4815815 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
SRR1180355 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR28351554 Sensitive La1.6;lineage4 None
SRR1196566 Other lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4407463 HR-TB None
ERR4819241 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1181325 Sensitive lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1180406 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1180300 Sensitive lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR26399973 Other La3;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR1196677 Other lineage2.2 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR13285068 Sensitive lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR736848 Other lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736856 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR11465665 Other lineage4.1.1.3 None
SRR6789626 Other None
SRR1181283 Sensitive lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283032 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR1172728 RR-TB La3 None
SRR28119777 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR4816656 Other lineage4.9 None
SRR1172234 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR779852 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
SRR1184381 MDR-TB None
SRR28119805 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR28119827 Other La3;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
SRR1172951 Other lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR1196583 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR363453 Sensitive lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None