Rv0005 - c.891T>C


Drug resistance types
117 Sensitive 5 RR-TB 138 HR-TB 9 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 81 Other
lineage Counts
lineage Count
lineage4 96
139
lineage4.1.2 1
lineage2.2.1 10
lineage4.8.1 1
lineage4.4.1.2 1
lineage4.9 65
lineage4;lineage3.1 1
La1.2 1
lineage2 3
lineage1.1.3.1 1
lineage4.3.2 1
lineage4.3.4.2.1 1
La3 1
lineage2.2.1.1 1
lineage4.9;lineage2.2 1
lineage2.2 5
lineage4.4.1.1.1 1
lineage4.3.3 1
lineage3.1 2
lineage4.5 1
lineage4.9;La3 1
lineage6.3;lineage4.9;lineage2.1 1
lineage6.3;lineage2.2.1 1
lineage4.1 2
lineage4.1.1 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage2.1 1
lineage4.3 1
lineage4;lineage2 1
lineage4.8 3
lineage4.8;La3 1
lineage4.1.1.2 1
lineage3 1
lineage1.1.2 1
lineage4.1.2.1 1
lineage4.9;lineage2.1 1
lineage4.2.1 1
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 355
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR502510 Sensitive lineage4 None
ERR5311099 HR-TB None
ERR502532 HR-TB None
SRR9970978 Sensitive lineage4.1.2 None
ERR5311081 HR-TB None
SRR9971270 RR-TB lineage2.2.1 None
SRR7496471 Sensitive None
ERR5311090 HR-TB None
SRR9971150 RR-TB lineage4.8.1 None
SRR7535082 Sensitive lineage4 None
SRR7535086 Other None
ERR323041 HR-TB None
ERR323066 Sensitive lineage4 None
ERR323043 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR1034652 Other None
ERR323085 Sensitive lineage4 None
ERR067699 HR-TB lineage4 None
ERR067712 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR323108 HR-TB lineage4 None
ERR323107 Other lineage4 None
ERR1063855 Other lineage4 None
ERR1035122 Sensitive None
ERR1035157 Other lineage4.9 None
ERR1063857 HR-TB None
ERR1063896 Sensitive None
ERR137286 Sensitive lineage4 None
ERR108471 HR-TB lineage4 None
ERR133825 Sensitive lineage4 None
ERR3283025 HR-TB None
ERR3283021 HR-TB None
ERR3283014 HR-TB None
ERR3283032 HR-TB None
ERR3283027 HR-TB None
ERR3283024 Other None
ERR3283030 HR-TB lineage4.9 None
ERR3283048 HR-TB lineage4.9 None
ERR3283031 HR-TB None
ERR3283040 HR-TB None
ERR3283036 HR-TB None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR349264 Sensitive lineage4 None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3445504 HR-TB None
ERR3468544 HR-TB None
ERR349298 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR373945 HR-TB lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR3797069 Other None
ERR373947 Sensitive lineage4 None
ERR3797014 Other None
ERR3797044 Other None
ERR3797048 HR-TB None
ERR3797061 Other None
ERR373946 Sensitive lineage4 None
ERR3797016 HR-TB None
ERR3797015 HR-TB None
ERR3797017 Other None
ERR3797036 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797063 HR-TB None
ERR3797081 Sensitive lineage4 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797087 Sensitive lineage4 None
ERR3797083 HR-TB None
ERR3797086 Other lineage4.9 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR405209 Sensitive lineage4 None
ERR4188350 HR-TB None
ERR4178226 Sensitive lineage4 None
ERR4596910 Sensitive lineage4 None
ERR4407463 HR-TB None
ERR4798431 HR-TB None
ERR473334 HR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769497 HR-TB La1.2 None
ERR4769521 HR-TB None
ERR4796254 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797264 Sensitive None
ERR473323 HR-TB lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR4798823 HR-TB lineage4 None
ERR4811105 HR-TB None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR6359045 HR-TB None
ERR4811142 MDR-TB None
ERR6865502 Sensitive lineage4 None
ERR6359066 HR-TB lineage4 None
ERR736848 HR-TB None
ERR6866410 Sensitive None
ERR6866547 Sensitive lineage4 None
ERR702404 HR-TB None
ERR702406 HR-TB None
ERR736831 HR-TB lineage4.9 None
ERR736834 Sensitive lineage4 None
ERR736839 Other None
ERR736872 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR751326 Sensitive lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR9119669 HR-TB None
ERR176549 Other lineage4.3.4.2.1 None
ERR8976043 HR-TB None
SRR10808399 Sensitive lineage4 None
ERR9786843 Other None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1169249 Other La3 None
SRR1158918 Sensitive lineage4 None
SRR1167384 Other lineage4 None
SRR1169194 Other None
SRR1172728 MDR-TB None
SRR1169306 Other None
SRR1172234 Other None
SRR1172717 Other lineage4.9 None
SRR1172857 MDR-TB None
SRR1172807 Sensitive lineage4.9 None
SRR1172817 HR-TB None
SRR1173166 Other lineage4.9 None
SRR1172951 Other None
SRR1173153 HR-TB None
SRR1172885 HR-TB lineage4.9 None
SRR1173118 Other None
SRR1173363 HR-TB None
SRR1175052 HR-TB lineage4.9 None
SRR1173384 Other lineage4 None
SRR1173400 Other None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1173484 Other lineage4 None
SRR1173629 Other None
SRR1173788 Other None
SRR1175049 RR-TB None
SRR1175074 MDR-TB None
SRR1180148 Sensitive lineage4.9 None
SRR1175090 Other lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR1180406 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180977 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1181214 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181289 Other lineage2.2.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1183049 Other lineage2.2 None
SRR1181402 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1183054 Sensitive lineage4.9 None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1196494 MDR-TB None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1184388 Other None
SRR1196566 HR-TB None
SRR1196546 HR-TB None
SRR1196768 MDR-TB None
SRR1196677 HR-TB lineage2 None
SRR12142341 HR-TB None
SRR11972367 Sensitive lineage2.2.1 None
SRR14801749 Sensitive None
SRR12416824 HR-TB None
SRR18910194 HR-TB lineage2.2 None
SRR15368973 Other None
SRR18213713 HR-TB lineage4.5 None
SRR26399973 Other lineage4.9;La3 None
SRR8692825 Other lineage4.9 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR3675465 HR-TB None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR3675464 HR-TB lineage4.1 None
ERR176793 Other lineage4.1.1 None
ERR4815604 HR-TB None
ERR1035239 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675501 HR-TB None
SRR3675488 HR-TB None
SRR3675221 HR-TB None
ERR4814639 HR-TB lineage4 None
SRR3675236 HR-TB None
SRR3675234 Other None
ERR702405 Sensitive lineage2.1 None
SRR3675246 Sensitive lineage4 None
SRR3675558 HR-TB None
SRR3675265 Other lineage4 None
ERR176643 HR-TB None
ERR4817060 RR-TB None
ERR176568 Other lineage4.3 None
ERR4816999 Other None
ERR2027263 Other lineage4 None
ERR212033 HR-TB None
ERR4816466 HR-TB None
ERR212138 HR-TB lineage4 None
SRR3675571 HR-TB None
ERR4816656 HR-TB None
ERR216965 HR-TB lineage4.9 None
SRR3742665 HR-TB None
SRR5341384 Sensitive lineage4.9 None
ERR4816585 Other lineage2.2 None
ERR4815815 Sensitive lineage4 None
ERR4816762 Other lineage4;lineage2 None
ERR2228818 Sensitive lineage4.8 None
ERR234659 HR-TB None
ERR4817893 Other lineage4.8;La3 None
ERR4817667 HR-TB lineage4.8 None
ERR4817735 Other lineage4.8 None
ERR4818252 Other lineage4.1.1.2 None
ERR4818929 HR-TB None
ERR4818561 HR-TB lineage4 None
SRR5341425 Other lineage4 None
ERR4818615 Other None
SRR5341387 Other lineage4 None
SRR5341455 Sensitive lineage4 None
ERR4819546 HR-TB lineage3 None
SRR5341298 Sensitive lineage4 None
ERR4819781 Other lineage2.2.1 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341302 HR-TB None
SRR5341333 HR-TB None
SRR5341310 Other lineage1.1.2 None
SRR5341461 Sensitive lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341366 Sensitive lineage4 None
ERR4820854 Other lineage4.1.2.1 None
ERR4820185 Sensitive lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341467 Other lineage4 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR2693231 Other None
SRR5341469 Other lineage4 None
ERR2693230 Other None
ERR2693254 Other None
SRR6045503 HR-TB None
SRR6045526 HR-TB None
ERR2693257 Other None
SRR6045519 HR-TB None
SRR6045706 Sensitive lineage4 None
SRR6045555 HR-TB None
ERR4821655 Sensitive lineage4 None
SRR6046141 Other lineage4.9 None
SRR5535933 HR-TB None
SRR6046133 HR-TB None
SRR6044790 HR-TB None
SRR6045832 HR-TB lineage4.9 None
SRR6045795 HR-TB lineage2.2.1 None
ERR2693232 Other lineage4.9 None
SRR6045892 Sensitive None
SRR6044876 Sensitive lineage4 None
SRR6044835 Sensitive lineage4 None
SRR6044875 HR-TB lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6044890 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6046066 HR-TB None
SRR6045191 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6045327 HR-TB None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046594 HR-TB lineage4 None
SRR6046362 HR-TB None
SRR6046385 Other lineage4.9 None
SRR6046460 HR-TB None
SRR6046540 HR-TB None
SRR6046225 HR-TB None
SRR6046397 Other None
ERR4830353 Other None
SRR6046482 HR-TB None
SRR6046514 HR-TB None
ERR4831117 HR-TB None
SRR6046644 HR-TB None
SRR6511621 HR-TB None
ERR323037 HR-TB lineage4 None
ERR485006 HR-TB lineage4.9 None
SRR6046611 HR-TB lineage4.9 None
SRR6046897 Sensitive lineage4 None
SRR6789626 Other None
ERR4831546 HR-TB lineage2.2 None
ERR294248 HR-TB None
SRR6789624 MDR-TB lineage4.1 None
ERR11465665 Other lineage4.1.1.3 None