Rv0006 - c.459C>T


Drug resistance types
78 Sensitive 4 RR-TB 69 HR-TB 10 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 52 Other
lineage Counts
lineage Count
62
lineage2.2.1 12
lineage4 52
lineage4.1.2.1 9
lineage5.2 2
lineage1.1 1
lineage3.1 2
lineage4.1.1.3 3
lineage4.3.3 3
lineage4.3.4.2.1 4
lineage4.1.2 1
lineage4.9 40
La1.8.1 2
lineage4;lineage3.1 1
lineage4.5 2
lineage4.1.2.1.1 1
lineage4.3.2 1
lineage2.2.2 1
lineage4.4.1.1 1
lineage2.2.1.1 1
lineage1.1.1.1 1
lineage4.1 2
lineage3;lineage2.1 1
lineage2.1 1
lineage4;lineage1.1.2 1
lineage4.2.1 2
lineage5.1.4 1
lineage3 4
lineage4;lineage1.1 1
spoligotype Counts
spoligotype Count
None 215
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6325448 HR-TB None
SRR6046604 Sensitive lineage2.2.1 None
SRR6046514 HR-TB None
SRR6325447 HR-TB None
SRR6046644 HR-TB None
SRR6325442 HR-TB None
SRR6046802 Other lineage4 None
SRR6046897 Sensitive lineage4 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6046878 HR-TB lineage4 None
ERR4872094 MDR-TB lineage5.2 None
ERR3077978 Other lineage1.1 None
ERR323034 HR-TB lineage3.1 None
ERR11465665 Other lineage4.1.1.3 None
ERR294248 HR-TB None
SRR6831950 Other lineage4.3.3 None
ERR4831638 Sensitive None
ERR323038 HR-TB None
ERR323036 HR-TB None
ERR5311099 HR-TB None
ERR5311081 HR-TB None
ERR5311090 HR-TB None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR9970978 Sensitive lineage4.1.2 None
ERR323108 HR-TB lineage4 None
ERR323055 HR-TB None
ERR323041 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
ERR323107 Other lineage4 None
ERR3468544 HR-TB None
ERR11466044 Other lineage4.1.1.3 None
ERR3283017 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR11465511 Sensitive lineage4.3.4.2.1 None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR3797016 HR-TB None
ERR373947 Sensitive lineage4 None
ERR3797014 Other None
ERR3797082 Other lineage4.9 None
ERR3797017 Other None
ERR3797023 HR-TB La1.8.1 None
ERR3797061 Other None
ERR400326 Sensitive lineage4 None
ERR3797083 HR-TB None
ERR400320 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR400345 Other lineage4 None
ERR4797350 Sensitive lineage4.9 None
ERR4797313 HR-TB None
ERR4178226 Sensitive lineage4 None
ERR4188350 HR-TB None
ERR4798431 HR-TB None
ERR4812155 Sensitive None
ERR4799547 Sensitive lineage2.2.1 None
ERR4811031 Sensitive lineage4.5 None
ERR4811030 Sensitive None
ERR6865502 Sensitive lineage4 None
ERR6358991 HR-TB None
ERR5908228 Other lineage4.3.3 None
ERR6358837 HR-TB None
ERR6866547 Sensitive lineage4 None
ERR9119096 Other lineage4.3.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR8976043 HR-TB None
SRR069981 HR-TB lineage2.2.2 None
ERR9634265 Sensitive None
ERR9119500 MDR-TB lineage5.2 None
ERR9119669 HR-TB None
SRR10808805 Sensitive None
SRR1162740 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1175508 Other lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR13423544 Other lineage4.5 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR13861235 HR-TB lineage4.9 None
SRR13861146 Sensitive lineage4.9 None
SRR13861224 Sensitive lineage4.9 None
SRR13837514 Sensitive lineage4.9 None
SRR13861168 RR-TB lineage4.9 None
SRR13861322 Other lineage4.9 None
SRR13861305 Other lineage4.9 None
SRR13861368 RR-TB lineage4.9 None
SRR16157123 Other lineage4.9 None
SRR13861381 MDR-TB lineage4.9 None
SRR13861528 HR-TB lineage4.9 None
SRR13861534 Other lineage4.9 None
SRR13861611 Sensitive lineage4.9 None
SRR13861386 HR-TB lineage4.9 None
SRR13861400 Other lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR13861556 Other lineage4.9 None
SRR13861663 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR19324818 Sensitive lineage1.1.1.1 None
SRR1640750 HR-TB None
SRR1791696 Other La1.8.1 None
SRR12708416 Sensitive lineage4.1 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR3675464 HR-TB lineage4.1 None
SRR3675473 Sensitive lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
SRR6325445 HR-TB None
ERR1035239 HR-TB None
SRR3675486 HR-TB None
SRR3675482 HR-TB None
ERR161033 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675247 Other lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
SRR3675229 Other lineage4 None
ERR4815489 Sensitive lineage4.9 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675210 Sensitive lineage4.9 None
SRR3675234 Other None
SRR3675279 Other None
SRR3675265 Other lineage4 None
SRR3675318 Other lineage4.9 None
ERR176643 HR-TB None
SRR3675292 Sensitive lineage4 None
SRR3675387 Sensitive None
SRR3675383 HR-TB None
SRR3675514 Sensitive lineage4.9 None
ERR176751 HR-TB None
SRR3675510 Other None
SRR3675455 Sensitive lineage4 None
SRR3675537 Sensitive lineage4.9 None
SRR3675522 Other None
SRR3675527 RR-TB lineage4.9 None
SRR3675545 HR-TB None
SRR3675541 Sensitive lineage4.9 None
SRR3675570 Sensitive lineage4.9 None
SRR5341422 HR-TB lineage2.1 None
SRR3675558 HR-TB None
ERR212001 HR-TB None
SRR3675571 HR-TB None
ERR212121 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR2509673 Other lineage2.2.1 None
ERR163965 Sensitive lineage4.3.4.2.1 mw
ERR3275196 Other lineage2.2.1 nl
ERR2512770 Other lineage4.2.1 None
ERR2513283 Other lineage5.1.4 None
SRR5341400 HR-TB lineage4 None
SRR5341373 HR-TB lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4819322 Other lineage4;lineage1.1 None
SRR5341432 HR-TB lineage4 None
SRR5341313 HR-TB None
SRR5341293 HR-TB lineage4 None
SRR5341437 Sensitive lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
ERR2514552 Sensitive lineage3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341315 Sensitive None
ERR2446563 Other lineage2.2.1 nl
ERR2693231 Other None
SRR6045706 Sensitive lineage4 None
ERR4821053 Other lineage3 None
SRR6045503 HR-TB None
ERR2693239 HR-TB None
ERR2693257 Other None
ERR278594 HR-TB None
SRR6044819 Sensitive lineage4.9 None
SRR6046046 Other None
SRR6045952 HR-TB None
SRR6325444 HR-TB None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046245 Other lineage4.9 None
ERR2517528 Other lineage3 nl