Rv2245 - c.105T>C


Drug resistance types
15 Sensitive 0 RR-TB 30 HR-TB 11 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 24 Other
lineage Counts
lineage Count
lineage4.9 36
lineage4.9;lineage7 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;M.canetti;lineage4.9 3
lineage3 2
M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.3.4 1
La1.7;lineage4.9;lineage7 3
La1.7;lineage4.9 5
lineage4.6.3;lineage4.9 1
La2;lineage4.9 2
lineage1;lineage4.9 1
lineage3.1.2.2 1
lineage4.9;lineage9 3
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage2.2.1 2
La1.7.1;lineage4.9 1
M.canetti;lineage4.9 1
1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.7 1
lineage4.3.2.1 1
La1.7.1;La1.7.X-unk4 1
La2;lineage4.9;lineage9 1
spoligotype Counts
spoligotype Count
None 80
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR29096150 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR11662690 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR29096410 Other lineage4.9 None
SRR16058122 Sensitive lineage3 None
ERR176651 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR736848 Other lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR1063846 HR-TB lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR926163 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9125793 Other lineage3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR6359082 Other lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR5341373 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR3675492 Other La1.7;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR181887 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR8345980 MDR-TB lineage2.2.1 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR2307639 MDR-TB lineage2.2.1 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR987722 MDR-TB None
SRR1180226 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR926165 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR926162 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR926160 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR971389 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None