Rv0407 - c.867C>T
Drug resistance types
65 Sensitive
1 RR-TB
126 HR-TB
19 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
79 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 39 |
| 138 | |
| lineage2.2.1 | 12 |
| lineage4 | 49 |
| lineage4.2.1 | 1 |
| lineage4.1 | 1 |
| La2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.4.1.2 | 1 |
| lineage2.2 | 5 |
| La1 | 2 |
| lineage4.1.3 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage2 | 4 |
| lineage1.1.2 | 3 |
| lineage3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.6.2.2 | 1 |
| lineage6 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.5 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage2.2.1;La3 | 1 |
| lineage4.9;La3 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.1 | 2 |
| lineage4.8;La3 | 1 |
| La1.8.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.9;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 297 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046305 | Other | lineage4.9 | None | SRR6046397 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6785268 | Sensitive | lineage4.2.1 | None | SRR6511621 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502510 | Sensitive | lineage4 | None | ERR502532 | HR-TB | None | SRR8217918 | HR-TB | None | ERR502943 | HR-TB | None | ERR323043 | HR-TB | None | SRR7496509 | Other | None | SRR7496517 | Other | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7535086 | Other | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1034634 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR1035157 | Other | lineage4.9 | None | ERR1035122 | Sensitive | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063896 | Sensitive | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283025 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283028 | Other | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797058 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR3797063 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR400336 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR5336148 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4407463 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4798099 | Other | None | ERR4769457 | Other | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800341 | Other | lineage3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6866022 | Other | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR6866639 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736867 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR7821210 | Sensitive | lineage1.2.2.1 | None | ERR9117709 | HR-TB | None | ERR9119669 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | ERR9787165 | Other | lineage6 | None | ERR9787197 | Other | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173153 | HR-TB | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172857 | MDR-TB | None | SRR1172728 | MDR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173629 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1175090 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1173778 | Other | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184380 | HR-TB | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1196566 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR14782405 | HR-TB | None | SRR12416824 | HR-TB | None | SRR14801749 | Sensitive | None | SRR19303778 | Sensitive | lineage1.2.1.2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR15368973 | Other | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR19304036 | HR-TB | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR25827682 | Other | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR176779 | HR-TB | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | ERR176778 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675236 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675221 | HR-TB | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675270 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR181887 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675311 | Other | None | ERR176751 | HR-TB | None | SRR3675456 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675510 | Other | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4817060 | RR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675572 | Other | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR212138 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR3742665 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4816656 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR5065629 | Other | lineage4.1.2.1 | vn | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4818394 | Other | lineage4.9 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341456 | Other | None | ERR1035138 | MDR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341313 | HR-TB | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5535933 | HR-TB | None | SRR5341315 | Sensitive | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045526 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR6045503 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044790 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None |
|---|
