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SRA data
Rv0006
- c.1645T>C
Drug resistance types
48 Sensitive
0 RR-TB
25 HR-TB
5 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
37 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
48
lineage2.2.1
8
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
3
lineage4
3
La1.7;lineage4.9;lineage7
3
M.canetti;lineage2.2.2;lineage6.2
2
La1.7;lineage4.9
2
lineage4.2.1
2
La1.6;La3;lineage4.9
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
118
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034634
HR-TB
lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR11252664
Other
lineage2.2.1
None
ERR161034
HR-TB
lineage4.3.4.2.1
None
ERR1873492
HR-TB
M.canetti;lineage2.2.2;lineage6.2
None
ERR212001
HR-TB
None
ERR216938
HR-TB
La1.7;lineage4.9
None
ERR2446382
Other
lineage4
None
ERR2512770
Sensitive
lineage4.2.1
None
ERR2513121
Sensitive
lineage3.1.3
None
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