Rv3696c - c.1176C>T


Drug resistance types
11 Sensitive 13 RR-TB 43 HR-TB 31 MDR-TB 5 Pre-XDR-TB 2 XDR-TB 103 Other
lineage Counts
lineage Count
lineage4.9;lineage6.3 4
lineage4.9 62
lineage2.1 3
lineage2.1;lineage4.9 11
lineage2.1;lineage4.9;lineage6.3 9
lineage4.1.3 2
lineage2.2.1 6
lineage4.6.2.2 3
lineage4.9;lineage9 2
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage4.1.2.1 10
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage2 1
M.canetti;lineage4.9 2
lineage4.1.2 1
lineage4.8 2
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage3 4
13
lineage4.5 1
La3;lineage2.1;lineage6.3 1
La1.7;lineage4.9 5
lineage2.2 2
lineage4.3.4.2.1 1
La3;lineage2.1;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La2;lineage2.2 1
lineage2.1;lineage6.3 1
La2;lineage4.9 2
lineage4 3
lineage3.1.2.2 1
lineage4.1;lineage4.8 2
lineage4.1.1.1 2
lineage4.1.1.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.3.1 1
La1.7.X-unk4;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 2
La3;lineage1.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.6.1.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage5.2 2
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.2;lineage4.9 2
lineage2.2.1;lineage4.1.2.1 1
La3;lineage2.2.1 1
lineage4.4.1.2 1
lineage6.1.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 2
La3;M.canetti;lineage2.2.1 1
lineage2.2.2 1
spoligotype Counts
spoligotype Count
None 208
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR373946 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR363498 Other lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR8217918 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR369160 Sensitive lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR3797047 MDR-TB lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4818347 Other lineage4.1.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1180137 RR-TB lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR363479 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR363446 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
ERR9786604 Other None
SRR6789626 Other None
SRR18213713 HR-TB None
ERR212001 HR-TB None
ERR349300 Other lineage4.9 None
ERR752229 Other lineage4.5 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR3283055 HR-TB lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR369163 Other lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR1173778 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR3675248 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR6045706 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR10808730 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675260 Sensitive lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR11662690 HR-TB lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR4811493 HR-TB lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786671 Other None
ERR234659 HR-TB None
SRR25827682 Other None
ERR9787197 Other None
SRR3675236 Other None
ERR369162 Other lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
ERR363499 Other lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR349265 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR26399490 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1173400 Other lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR349299 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR349264 Other lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR108471 HR-TB lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4178226 Sensitive lineage4 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR363453 Other lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR363447 Other lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR373947 Other lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9787165 Other lineage6.1.3 None
ERR363500 Other lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR6865513 Other lineage4.1.2.1 None
ERR3283021 MDR-TB lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6045503 Other lineage4.9 None
ERR349266 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR161037 HR-TB lineage4.9 None
ERR369159 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR9786843 Other None
ERR2514692 Other None
ERR4407463 HR-TB None
SRR3675441 RR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR363449 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR369158 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1183049 RR-TB lineage2.2 None
SRR18910194 HR-TB lineage2.2.2 None
ERR4817896 HR-TB lineage2.2.1 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4816466 HR-TB lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR9896144 Other lineage3 None
ERR702406 Other lineage2.1 None
ERR363506 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
ERR990545 RR-TB lineage3 None