EBG00000313339 - n.3089T>C
Drug resistance types
54 Sensitive
3 RR-TB
47 HR-TB
9 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 3 |
| lineage4 | 53 |
| 52 | |
| lineage4.9 | 12 |
| lineage1.1.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.2 | 4 |
| lineage4.3.4 | 1 |
| La1.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1 | 10 |
| lineage2.2.1.1 | 1 |
| lineage3 | 1 |
| La3 | 1 |
| lineage4.2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.8 | 2 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 158 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798099 | Other | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6198317 | Other | La1.2 | None | ERR6358979 | Other | None | ERR6359045 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR6358991 | HR-TB | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR736872 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR970441 | RR-TB | lineage2.2.1.1 | None | ERR990545 | Other | lineage3 | None | ERR9786843 | Other | None | SRR10808805 | Sensitive | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1167384 | Other | lineage4 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1169306 | Other | None | SRR1173777 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1173568 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR14801749 | Sensitive | None | SRR8692822 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR8692905 | HR-TB | None | SRR8692887 | Other | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR8692868 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR181887 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR176643 | HR-TB | None | ERR176651 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR212121 | HR-TB | None | ERR176751 | HR-TB | None | ERR212033 | HR-TB | None | ERR212001 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4816656 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | ERR4818929 | HR-TB | None | SRR5341453 | Sensitive | None | SRR5341396 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR6045519 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6044835 | Sensitive | lineage4 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6045158 | Other | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6511621 | HR-TB | None | SRR6046397 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6831725 | Sensitive | lineage4.8 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323045 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR3445501 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None |
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