Rv0006 - c.1803C>A
Drug resistance types
1 Sensitive
3 RR-TB
10 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage7 | 3 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage3 | 1 |
| lineage4.9 | 6 |
| lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage6.1.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage3.1.2.2 | 1 |
| La1.7;lineage4.9 | 2 |
| La1.7.1;lineage4.9 | 1 |
| 1 | |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1 | 1 |
| lineage2.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 28 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR3675582 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR3675280 | RR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR9786843 | Other | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR29096410 | Other | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
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