lineage | Count |
---|---|
53 | |
lineage4.1 | 2 |
lineage2.1 | 2 |
lineage4 | 68 |
lineage4.1.2 | 1 |
lineage4.9 | 14 |
lineage4.1.2.1 | 2 |
La1.3 | 1 |
La1.2 | 1 |
lineage1.1.2 | 1 |
lineage2.2.1 | 7 |
lineage2.2 | 4 |
lineage1.1.3.1 | 1 |
lineage4.3.4 | 1 |
lineage2.2.2 | 1 |
lineage7;lineage2.2.1.2 | 1 |
La1.8.1 | 1 |
La1.7.1 | 1 |
lineage1.1.1.1 | 1 |
lineage4.1.1.2 | 1 |
lineage4.8 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 166 |
ID | Drug resistance | Lineage | Country iso2 | ERR4831117 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR323066 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323045 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063858 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR349298 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR373947 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4769452 | HR-TB | None | ERR4769461 | Other | La1.3 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797474 | Other | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4798431 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR7162975 | MDR-TB | lineage2.2.1 | None | ERR6866639 | Other | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR736834 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR8025650 | MDR-TB | lineage2.2.2 | None | SRR11972429 | RR-TB | lineage2.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR14782405 | HR-TB | None | SRR1791747 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR181824 | HR-TB | lineage4 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675270 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR5341453 | Sensitive | None | SRR5065513 | Sensitive | lineage1.1.1.1 | vn | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341315 | Sensitive | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5535933 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | ERR2660539 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6045010 | Other | lineage4 | None | SRR6046492 | Other | None | SRR6046046 | Other | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None |
---|