Rv0006 - c.-659A>G


Drug resistance types
62 Sensitive 5 RR-TB 73 HR-TB 21 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 107 Other
lineage Counts
lineage Count
lineage4.9 109
8
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.1.1.1 2
M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2 3
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9 7
La1.6;La3;M.canetti;lineage4.2.2 1
La3;lineage4.9 14
La1.7;lineage4.9 8
M.canetti;lineage4.9 6
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage4.1;lineage4.8 2
lineage1;lineage4.9 2
La1.8.1 1
lineage4 5
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
lineage4.3.4.2 1
lineage4.1.2.1 4
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage1.1.3.1 1
lineage4.9;lineage6.3 6
lineage4.9;lineage7 5
lineage2.1 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.7;M.canetti;lineage4.9 5
lineage1.1.1 1
lineage3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.1.3 1
lineage4.1;lineage4.9 1
lineage4.5 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.4 1
La3;lineage4 1
La3;lineage2.1;lineage4.9 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage2.1;lineage4.9;lineage6.3 3
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.1.2 1
lineage4.8 1
La1.7;lineage3.1;lineage4 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.4.1 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage4.2 1
La1.2.BCG 1
La1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
lineage2.2.1 5
La1.6;lineage4 1
lineage4.2;lineage4.9 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
lineage2.2.1.2 1
La3;lineage2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.7 1
La2;lineage4.9 1
lineage4.3.2.1 2
lineage2.2.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1;lineage4.1.2 1
lineage3.1 1
La1.7;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 273
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1063858 HR-TB lineage4.9 None
ERR4407463 HR-TB None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1196768 MDR-TB None
ERR4811030 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR1063896 Sensitive None
ERR400320 Sensitive lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR26399973 Other La3;lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR3797015 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3797019 Other La1.8.1 None
ERR4178226 Sensitive lineage4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR3675260 Sensitive lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR29096900 Sensitive lineage4.3.4.2 None
ERR108471 HR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6046594 Sensitive lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR3797047 MDR-TB lineage4.9 None
ERR176751 Other lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR6044835 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR28044873 Pre-XDR-TB lineage3 None
ERR369156 Sensitive lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR3283055 HR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1167384 Other La3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR4796254 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR3283040 HR-TB lineage4.9 None
ERR369162 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
ERR3283028 Other La3;lineage4 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR369151 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
ERR3797048 Other La3;lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR373945 Sensitive lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6045219 HR-TB lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769474 HR-TB lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR11465151 Sensitive lineage4.3.4.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR363445 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR473332 Other lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR349296 Sensitive lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR5341456 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR9786843 Other None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR4817060 Other None
ERR181824 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR176778 HR-TB lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046382 Sensitive lineage2.2.1 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR2693252 Sensitive lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR176651 Other lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR363453 Sensitive lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR387051 Other lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR20969677 HR-TB La3;lineage2 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR736848 Other lineage4.9 None
ERR4830353 Other La1.7 None
ERR323115 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR2027263 Other lineage4 None
ERR2446566 Other lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR11465152 Sensitive lineage4.3.4.1 None
SRR6789626 Other None
ERR3797063 Sensitive La3;lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR28119777 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR5311094 HR-TB lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1184294 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR1184381 MDR-TB None
SRR28351339 MDR-TB lineage4 None
ERR212033 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR10808730 Other lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR28119827 Other La3;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6045503 Sensitive lineage4.9 None