EBG00000313339 - n.1545G>C
Drug resistance types
39 Sensitive
2 RR-TB
27 HR-TB
16 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.9 | 65 |
| lineage2.2.1 | 10 |
| lineage4.3.3 | 4 |
| La1.7;lineage4.9 | 5 |
| M.canetti;lineage4.9 | 1 |
| La3;lineage4.9 | 6 |
| lineage4.1.2.1 | 6 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1;lineage4.9 | 2 |
| La1.2.BCG | 1 |
| lineage4.3.2 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.4.1 | 4 |
| La1.2;La1.8.1 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.9.1 | 1 |
| La1.4 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.5 | 1 |
| lineage2.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| 1 | |
| lineage4.8 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.6.1.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 139 |
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR373946 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | SRR6045706 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | SRR12708372 | Sensitive | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR363453 | Other | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR3803778 | Other | lineage6.1.3 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR349300 | Other | lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR373945 | Other | lineage4.9 | None | ERR1035316 | MDR-TB | lineage4.3.2 | br | ERR369157 | Sensitive | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | ERR1213930 | Other | lineage4.3.2 | pe | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR1035315 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR3283018 | HR-TB | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR349266 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR1035299 | MDR-TB | lineage4.1.2.1 | br | ERR369159 | Other | lineage4.9 | None | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR363446 | Other | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR1213874 | MDR-TB | lineage2.2.1 | kr | SRR13423649 | Other | lineage2.2.1 | None | ERR363421 | Other | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR1035296 | HR-TB | lineage4.9 | br | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR4811031 | Other | lineage4.5 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR349299 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR373947 | Other | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR12708416 | Sensitive | None | ERR369162 | Other | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR11466070 | Sensitive | lineage4.3.4.1 | None | ERR369151 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR387051 | RR-TB | lineage4.9 | None |
|---|
