EBG00000313339 - n.1545G>C


Drug resistance types
39 Sensitive 2 RR-TB 27 HR-TB 16 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 49 Other
lineage Counts
lineage Count
lineage4.9 65
lineage4.3.4.1 4
lineage4.1.2.1 6
lineage4.6.3;lineage4.9 1
lineage4.6.1.1 2
lineage2.2.1 10
La1.7;lineage4.9 5
lineage4.2.1.1;lineage4.3.3 1
lineage4.1.2 1
La1.2;La1.8.1 1
lineage4.5 1
lineage2.2.2 1
La3;lineage4.9 6
lineage4.4.1.1 1
lineage4.3.2.1 2
M.canetti;lineage4.9 1
lineage1.1.1 1
La1.4 1
lineage4.3.3 4
lineage4.1.1.3;lineage4.9 2
1
lineage4.8 1
lineage4.3.2 2
lineage4.9;lineage7 2
lineage4.6.1.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage1.2.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.9.1 1
lineage4.1;lineage4.9 2
La1.2.BCG 1
La1.7.X-unk4;lineage4.9 1
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.3.4.2.1 2
lineage4.3.4.2 1
lineage4.1.1.3 1
lineage6.1.3 1
spoligotype Counts
spoligotype Count
None 139
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675260 Sensitive lineage4.9 None
ERR1035315 Pre-XDR-TB lineage4.3.4.1 br
ERR3283018 HR-TB lineage4.9 None
ERR363479 Other lineage4.9 None
ERR1035299 MDR-TB lineage4.1.2.1 br
ERR369159 Other lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR9971114 Other lineage2.2.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR1213874 MDR-TB lineage2.2.1 kr
ERR11466070 Sensitive lineage4.3.4.1 None
ERR369158 Other lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR1035296 HR-TB lineage4.9 br
ERR349296 Sensitive lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR3675492 Other La1.7;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR373946 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR4811031 Other lineage4.5 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR108471 HR-TB lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR1035294 MDR-TB lineage4.1.2.1 br
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR373947 Other lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
SRR12708419 Other lineage4.3.3 None
ERR4819422 HR-TB lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR349266 Other lineage4.9 None
ERR1035300 HR-TB lineage4.1.2.1 br
ERR363446 Other lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR12708416 Sensitive None
ERR369162 Other lineage4.9 None
ERR9786639 Sensitive lineage4.8 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR363449 Other lineage4.9 None
ERR1035316 MDR-TB lineage4.3.2 br
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR13423649 Other lineage2.2.1 None
ERR363421 Other lineage4.9 None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR4820773 HR-TB lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR1035297 MDR-TB lineage4.3.4.1 br
ERR736837 Pre-XDR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR1175508 Sensitive lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR363498 Other lineage4.9 None
ERR1213875 Sensitive lineage4.3.3 de
ERR1213930 Other lineage4.3.2 pe
SRR6045706 Other lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR5341296 Sensitive lineage4.9 None
ERR363490 Other lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4797313 Sensitive lineage2.2.1 None
ERR363453 Other lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
ERR363447 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR369156 Sensitive lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4811493 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR349300 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR373945 Other lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR1034907 Pre-XDR-TB lineage4.3.4.1 pt
ERR400320 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR1035295 MDR-TB lineage4.1.2.1 br
ERR4799547 HR-TB lineage2.2.1 None
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
ERR369161 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR349265 Other lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR3797063 Other La3;lineage4.9 None
ERR349264 Other lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035312 Pre-XDR-TB lineage4.3.3 br
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6044835 Other lineage4.9 None
ERR3803778 Other lineage6.1.3 None
ERR363500 Other lineage4.9 None