EBG00000313339 - n.1545G>C
Drug resistance types
96 Sensitive
1 RR-TB
35 HR-TB
17 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 2 |
| lineage4.3.4.1 | 3 |
| lineage4.1.2.1 | 12 |
| lineage4.9 | 39 |
| lineage4.3.2 | 2 |
| lineage4.3.3 | 2 |
| lineage2.2.1 | 10 |
| lineage4.9;lineage4.1 | 1 |
| lineage4 | 59 |
| lineage4.6.1.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| 33 | |
| lineage6 | 1 |
| La1 | 1 |
| lineage4.5 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.8 | 1 |
| lineage1.1.1 | 1 |
| La1.4 | 1 |
| lineage4.1 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage4.8.2 | 1 |
| lineage4.1.1 | 2 |
| lineage4.6.1.2 | 2 |
| lineage3 | 3 |
| lineage4.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 195 |
Geographic prevalence
Country level data for this variant is available for 20 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | ERR1035296 | HR-TB | lineage4.9 | br | ERR1035299 | MDR-TB | lineage4.1.2.1 | br | ERR1035315 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR1035316 | MDR-TB | lineage4.3.2 | br | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | ERR1035317 | RR-TB | lineage4.3.4.2 | br | ERR1213874 | MDR-TB | lineage2.2.1 | kr | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | ERR1213875 | Other | lineage4.3.3 | de | ERR3283047 | HR-TB | None | ERR1213930 | Other | lineage4.3.2 | pe | ERR1213937 | Sensitive | lineage4.1.2.1 | pe | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR349264 | Sensitive | lineage4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR3803778 | Other | lineage6 | None | ERR400345 | Other | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR4797313 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR4812155 | Sensitive | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR8692897 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR3675222 | Other | None | SRR8692887 | Other | None | SRR3675477 | Other | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4814683 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675279 | Other | None | ERR4814976 | Other | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | ERR4815589 | Sensitive | lineage4.8.2 | None | SRR3675522 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR2124081 | MDR-TB | lineage4.6.1.2 | None | ERR4816656 | HR-TB | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR2512625 | Sensitive | lineage4.3.4.2.1 | gb | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4817998 | Other | lineage3 | None | ERR2513496 | Sensitive | lineage3 | gb | ERR4818929 | HR-TB | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818958 | Other | lineage4.1.1 | gb | ERR2513283 | Other | lineage5.1.4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4821588 | Sensitive | lineage4.1.1.3 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR6045503 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | ERR2693227 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044985 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045086 | Other | lineage3 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046492 | Other | None | SRR6046802 | Other | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR4831638 | Sensitive | None | ERR4831716 | HR-TB | lineage1.1.1.1 | None | ERR4831794 | MDR-TB | lineage2.2.1.1 | None | SRR6982196 | Sensitive | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | ERR502532 | HR-TB | None | SRR8217918 | HR-TB | None | ERR502943 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7496523 | Other | lineage4.7 | None | ERR323108 | HR-TB | lineage4 | None | SRR9971114 | Other | lineage2.2.1 | None |
|---|
