Rv0676c - c.2535C>G


Drug resistance types
16 Sensitive 2 RR-TB 50 HR-TB 20 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 26 Other
lineage Counts
lineage Count
lineage4.9 33
M.canetti;lineage2.1;lineage4.9 7
La1.7.1 1
lineage4.6.3;lineage4.9 2
La1.7;lineage4.9 5
La2;lineage4.9 2
lineage2.2.1 3
lineage2.1;lineage4.9 8
lineage4.9;lineage9 1
lineage3.1.2.2 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage4.9 3
lineage4.4.1.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage1.1.2 1
La1;lineage4.1.2 1
lineage4.9;lineage7 2
lineage2.2 3
lineage2.1;lineage4.1.1.1;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.9;lineage6.1.3 1
lineage2.2.1.2;lineage7 1
lineage2.1;lineage4.9;lineage6.3 3
lineage2.2.1.2 1
lineage4.3.4 1
La1.7 1
La1.7;lineage3.1;lineage4 1
La1;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.4.1.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
La3;lineage2 1
La2;lineage2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.3.4.2.1 3
La3;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.6.2.2 2
La3;lineage4.9 1
lineage4.3.4.1 2
lineage4.2;lineage4.8.1;lineage4.9 1
lineage3 1
lineage4.3.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 116
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6044875 Sensitive lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4797193 HR-TB lineage1.1.2 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR1180226 HR-TB lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None
SRR29096882 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR323107 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4830353 Other La1.7 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR10808805 Other La1;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR473332 Other lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR20969677 HR-TB La3;lineage2 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR5535933 Other lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR1196546 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR1034634 HR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR11465579 Sensitive lineage4.3.4.1 None
SRR5341456 Other lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
SRR28044873 Pre-XDR-TB lineage3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR6866807 Other lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None