Rv3457c - c.768G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
27 Sensitive
1 RR-TB
27 HR-TB
3 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 51 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage6.1.3 | 42 |
| lineage4.3.4 | 1 |
| lineage4.3.3 | 1 |
| La2;lineage2.2 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.1 | 3 |
| lineage2.2.2 | 1 |
| lineage6 | 1 |
| La1.7.1 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage6.1.1;lineage6.1.3 | 1 |
| 2 | |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.2.1;lineage6.1.3 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La2;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage3 | 1 |
| La1.2.BCG;lineage4.9 | 1 |
| lineage6.1.3;lineage6.3.3 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.3.4.1 | 2 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.4.2;lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 128 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3804036 | Other | lineage6.1.3 | None | ERR3804128 | Other | lineage6.1.3 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR9787233 | Other | lineage6.1.3 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR9787147 | Other | lineage6.1.3 | None | ERR9787355 | Other | lineage6.1.3 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR1023291 | Other | lineage6.1.3 | None | ERR3806665 | Other | lineage6.1.3 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9787080 | Other | lineage6.1.3 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR9787151 | Other | lineage6.1.3 | None | ERR4192381 | Other | lineage6.1.3 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR3799573 | Other | lineage6.1.3 | None | ERR9787127 | Other | lineage6.1.1;lineage6.1.3 | None | ERR3803967 | Other | lineage6.1.3 | None | ERR9787348 | Other | lineage6.1.3 | None | ERR9787316 | Other | lineage6.1.3 | None | ERR9787369 | Other | lineage6.1.3 | None | SRR5341456 | Other | lineage4.9 | None | ERR3804121 | Other | lineage6.1.3 | None | ERR9787141 | Other | lineage6.1.3 | None | ERR9787197 | Other | None | ERR181824 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR9786040 | Other | lineage2.2.1;lineage6.1.3 | None | ERR3804133 | Other | lineage6.1.3 | None | ERR3806599 | Other | lineage6.1.3 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR9787241 | Other | lineage6.1.3 | None | ERR3804013 | Other | lineage6.1.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR2512682 | Other | lineage6.1.3 | None | ERR3806829 | Other | lineage6.1.3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR1023239 | Other | lineage6.1.3 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR9787311 | Other | lineage6.1.3 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR1023233 | Other | lineage6.1.3 | None | ERR473332 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR10465868 | Other | lineage6.1.3;lineage6.3.3 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR4192362 | Other | lineage6.1.3 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR926157 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR3803981 | Other | lineage6.1.3 | None | ERR9787337 | Other | lineage6.1.3 | None | ERR9787130 | Other | lineage6.1.3 | None | ERR9787112 | Other | lineage6.1.3 | None | ERR9787185 | Other | lineage6.1.3 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR9787260 | Other | lineage6.1.3 | None | ERR176741 | Other | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | ERR4192349 | Other | lineage6.1.3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289728 | Other | lineage6.1.3 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR9787140 | Other | lineage6.1.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR3801615 | Other | lineage6.1.3 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR9786868 | Other | lineage4.3.4.2;lineage6.1.3 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR9787120 | Other | lineage6.1.3 | None | ERR3806821 | Other | lineage6.1.3 | None |
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